(5 nodes) Ubiquitin-like autophagy protein Apg12 network (Sus scrofa)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAP1LC3B	Microtubule-associated protein 1 light chain 3 beta. (125 aa)
	GABARAPL1	Uncharacterized protein. (148 aa)
	MAP1LC3A	Microtubule-associated protein 1 light chain 3 alpha. (121 aa)
	ATG12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
	GABARAP	Uncharacterized protein. (98 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG12	GABARAP	ENSSSCP00000054263	ENSSSCP00000020071	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Uncharacterized protein.	0.969
ATG12	GABARAPL1	ENSSSCP00000054263	ENSSSCP00000000681	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Uncharacterized protein.	0.970
ATG12	MAP1LC3A	ENSSSCP00000054263	ENSSSCP00000007753	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule-associated protein 1 light chain 3 alpha.	0.878
ATG12	MAP1LC3B	ENSSSCP00000054263	ENSSSCP00000002867	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule-associated protein 1 light chain 3 beta.	0.887
GABARAP	ATG12	ENSSSCP00000020071	ENSSSCP00000054263	Uncharacterized protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.969
GABARAP	GABARAPL1	ENSSSCP00000020071	ENSSSCP00000000681	Uncharacterized protein.	Uncharacterized protein.	0.902
GABARAP	MAP1LC3A	ENSSSCP00000020071	ENSSSCP00000007753	Uncharacterized protein.	Microtubule-associated protein 1 light chain 3 alpha.	0.718
GABARAP	MAP1LC3B	ENSSSCP00000020071	ENSSSCP00000002867	Uncharacterized protein.	Microtubule-associated protein 1 light chain 3 beta.	0.706
GABARAPL1	ATG12	ENSSSCP00000000681	ENSSSCP00000054263	Uncharacterized protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.970
GABARAPL1	GABARAP	ENSSSCP00000000681	ENSSSCP00000020071	Uncharacterized protein.	Uncharacterized protein.	0.902
GABARAPL1	MAP1LC3A	ENSSSCP00000000681	ENSSSCP00000007753	Uncharacterized protein.	Microtubule-associated protein 1 light chain 3 alpha.	0.714
GABARAPL1	MAP1LC3B	ENSSSCP00000000681	ENSSSCP00000002867	Uncharacterized protein.	Microtubule-associated protein 1 light chain 3 beta.	0.713
MAP1LC3A	ATG12	ENSSSCP00000007753	ENSSSCP00000054263	Microtubule-associated protein 1 light chain 3 alpha.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.878
MAP1LC3A	GABARAP	ENSSSCP00000007753	ENSSSCP00000020071	Microtubule-associated protein 1 light chain 3 alpha.	Uncharacterized protein.	0.718
MAP1LC3A	GABARAPL1	ENSSSCP00000007753	ENSSSCP00000000681	Microtubule-associated protein 1 light chain 3 alpha.	Uncharacterized protein.	0.714
MAP1LC3A	MAP1LC3B	ENSSSCP00000007753	ENSSSCP00000002867	Microtubule-associated protein 1 light chain 3 alpha.	Microtubule-associated protein 1 light chain 3 beta.	0.902
MAP1LC3B	ATG12	ENSSSCP00000002867	ENSSSCP00000054263	Microtubule-associated protein 1 light chain 3 beta.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.887
MAP1LC3B	GABARAP	ENSSSCP00000002867	ENSSSCP00000020071	Microtubule-associated protein 1 light chain 3 beta.	Uncharacterized protein.	0.706
MAP1LC3B	GABARAPL1	ENSSSCP00000002867	ENSSSCP00000000681	Microtubule-associated protein 1 light chain 3 beta.	Uncharacterized protein.	0.713
MAP1LC3B	MAP1LC3A	ENSSSCP00000002867	ENSSSCP00000007753	Microtubule-associated protein 1 light chain 3 beta.	Microtubule-associated protein 1 light chain 3 alpha.	0.902