12 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLA-DQB1	SLA class II histocompatibility antigen, DQ haplotype C beta chain. (271 aa)
	HLA-DRA	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family. (252 aa)
	BRD2	Bromodomain-containing protein 2 isoform 1. (825 aa)
	HLA-DOB	HLA class II histocompatibility antigen, DO beta chain. (277 aa)
	SLA-DMB	Major histocompatibility complex, class II, DM beta. (272 aa)
	SLA-DOA	Ig-like domain-containing protein; Belongs to the MHC class II family. (360 aa)
	KIFC1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (704 aa)
	CD4	CD4 molecule. (494 aa)
	SLA-DMA	Ig-like domain-containing protein; Belongs to the MHC class II family. (290 aa)
	BTNL2	Butyrophilin like 2. (587 aa)
	SLA-DQA1	SLA class II histocompatibility antigen, DQ haplotype D alpha chain. (255 aa)
	SLA-DRB1	Ig-like domain-containing protein. (307 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRD2	BTNL2	ENSSSCP00000065245	ENSSSCP00000001563	Bromodomain-containing protein 2 isoform 1.	Butyrophilin like 2.	0.855
BRD2	HLA-DRA	ENSSSCP00000065245	ENSSSCP00000001567	Bromodomain-containing protein 2 isoform 1.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.517
BRD2	KIFC1	ENSSSCP00000065245	ENSSSCP00000001639	Bromodomain-containing protein 2 isoform 1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.514
BTNL2	BRD2	ENSSSCP00000001563	ENSSSCP00000065245	Butyrophilin like 2.	Bromodomain-containing protein 2 isoform 1.	0.855
BTNL2	HLA-DRA	ENSSSCP00000001563	ENSSSCP00000001567	Butyrophilin like 2.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.521
BTNL2	KIFC1	ENSSSCP00000001563	ENSSSCP00000001639	Butyrophilin like 2.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.645
BTNL2	SLA-DRB1	ENSSSCP00000001563	ENSSSCP00000055121	Butyrophilin like 2.	Ig-like domain-containing protein.	0.457
CD4	HLA-DOB	ENSSSCP00000019155	ENSSSCP00000001577	CD4 molecule.	HLA class II histocompatibility antigen, DO beta chain.	0.510
CD4	HLA-DRA	ENSSSCP00000019155	ENSSSCP00000001567	CD4 molecule.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.936
CD4	SLA-DQA1	ENSSSCP00000019155	ENSSSCP00000070034	CD4 molecule.	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	0.613
CD4	SLA-DRB1	ENSSSCP00000019155	ENSSSCP00000055121	CD4 molecule.	Ig-like domain-containing protein.	0.773
HLA-DOB	CD4	ENSSSCP00000001577	ENSSSCP00000019155	HLA class II histocompatibility antigen, DO beta chain.	CD4 molecule.	0.510
HLA-DOB	HLA-DRA	ENSSSCP00000001577	ENSSSCP00000001567	HLA class II histocompatibility antigen, DO beta chain.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.926
HLA-DOB	SLA-DMA	ENSSSCP00000001577	ENSSSCP00000030928	HLA class II histocompatibility antigen, DO beta chain.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.970
HLA-DOB	SLA-DMB	ENSSSCP00000001577	ENSSSCP00000001591	HLA class II histocompatibility antigen, DO beta chain.	Major histocompatibility complex, class II, DM beta.	0.887
HLA-DOB	SLA-DOA	ENSSSCP00000001577	ENSSSCP00000001596	HLA class II histocompatibility antigen, DO beta chain.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.948
HLA-DOB	SLA-DQA1	ENSSSCP00000001577	ENSSSCP00000070034	HLA class II histocompatibility antigen, DO beta chain.	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	0.889
HLA-DOB	SLA-DQB1	ENSSSCP00000001577	ENSSSCP00000062346	HLA class II histocompatibility antigen, DO beta chain.	SLA class II histocompatibility antigen, DQ haplotype C beta chain.	0.670
HLA-DOB	SLA-DRB1	ENSSSCP00000001577	ENSSSCP00000055121	HLA class II histocompatibility antigen, DO beta chain.	Ig-like domain-containing protein.	0.587
HLA-DRA	BRD2	ENSSSCP00000001567	ENSSSCP00000065245	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	Bromodomain-containing protein 2 isoform 1.	0.517