STRINGSTRING
NR2C1 NR2C1 PSMA1 PSMA1 TRIM40 TRIM40 DDO DDO ARL8A ARL8A DAO DAO UPP1 UPP1 PLA2G5 PLA2G5 GALNT3 GALNT3 TBC1D8B TBC1D8B FOXR2 FOXR2 RTN1 RTN1 SCUBE2 SCUBE2 HIPK3 HIPK3 MSRB2 MSRB2 EDNRA EDNRA MAP4K4 MAP4K4 ADAL ADAL SMOC2 SMOC2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NR2C1Nuclear receptor subfamily 2 group C member 1 isoform a. (605 aa)
PSMA1Proteasome subunit alpha type. (269 aa)
TRIM40Tripartite motif containing 40. (300 aa)
DDOD-aspartate oxidase; Selectively catalyzes the oxidative deamination of D- aspartate and its N-methylated derivative, N-methyl D-aspartate. Belongs to the DAMOX/DASOX family. (369 aa)
ARL8AADP ribosylation factor like GTPase 8A; Belongs to the small GTPase superfamily. Arf family. (186 aa)
DAOD-amino-acid oxidase; Regulates the level of the neuromodulator D-serine in the brain. Has high activity towards D-DOPA and contributes to dopamine synthesis. Could act as a detoxifying agent which removes D-amino acids accumulated during aging. Acts on a variety of D-amino acids with a preference for those having small hydrophobic side chains followed by those bearing polar, aromatic, and basic groups. Does not act on acidic amino acids. (371 aa)
UPP1Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. (410 aa)
PLA2G5Phospholipase A(2). (138 aa)
GALNT3Polypeptide N-acetylgalactosaminyltransferase. (633 aa)
TBC1D8BTBC1 domain family member 8B. (1101 aa)
FOXR2Forkhead box R2. (315 aa)
RTN1Reticulon. (770 aa)
SCUBE2CUB domain-containing protein. (539 aa)
HIPK3Homeodomain-interacting protein kinase 3 isoform X1. (1216 aa)
MSRB2Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (182 aa)
EDNRAEndothelin-1 receptor; Receptor for endothelin-1. Mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. The rank order of binding affinities for ET-A is: ET1 > ET2 >> ET3 (By similarity). (427 aa)
MAP4K4Mitogen-activated protein kinase kinase kinase kinase 4. (1378 aa)
ADALAdenosine deaminase-like protein isoform X1. (355 aa)
SMOC2SPARC related modular calcium binding 2. (613 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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