9 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LUM	Lumican. (341 aa)
	ASPN	Asporin. (370 aa)
	LOX	Protein-lysine 6-oxidase, short form; Responsible for the post-translational oxidative deamination of peptidyl lysine residues in precursors to fibrous collagen and elastin. Regulator of Ras expression. May play a role in tumor suppression. Plays a role in the aortic wall architecture (By similarity); Belongs to the lysyl oxidase family. (419 aa)
	COL1A2	Fibrillar collagen NC1 domain-containing protein. (1135 aa)
	PXDN	Peroxidasin. (1529 aa)
	BGN	Biglycan; May be involved in collagen fiber assembly. (338 aa)
	COL3A1	Collagen alpha-1(III) chain preproprotein. (1471 aa)
	OGN	Osteoglycin/mimecan. (298 aa)
	DCN	Decorin; May affect the rate of fibrils formation. (359 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASPN	COL3A1	ENSSSCP00000008621	ENSSSCP00000033771	Asporin.	Collagen alpha-1(III) chain preproprotein.	0.508
ASPN	LUM	ENSSSCP00000008621	ENSSSCP00000000978	Asporin.	Lumican.	0.536
ASPN	OGN	ENSSSCP00000008621	ENSSSCP00000045106	Asporin.	Osteoglycin/mimecan.	0.770
BGN	COL1A2	ENSSSCP00000029666	ENSSSCP00000016253	Biglycan; May be involved in collagen fiber assembly.	Fibrillar collagen NC1 domain-containing protein.	0.832
BGN	COL3A1	ENSSSCP00000029666	ENSSSCP00000033771	Biglycan; May be involved in collagen fiber assembly.	Collagen alpha-1(III) chain preproprotein.	0.711
BGN	DCN	ENSSSCP00000029666	ENSSSCP00000000977	Biglycan; May be involved in collagen fiber assembly.	Decorin; May affect the rate of fibrils formation.	0.876
BGN	LOX	ENSSSCP00000029666	ENSSSCP00000015138	Biglycan; May be involved in collagen fiber assembly.	Protein-lysine 6-oxidase, short form; Responsible for the post-translational oxidative deamination of peptidyl lysine residues in precursors to fibrous collagen and elastin. Regulator of Ras expression. May play a role in tumor suppression. Plays a role in the aortic wall architecture (By similarity); Belongs to the lysyl oxidase family.	0.562
BGN	LUM	ENSSSCP00000029666	ENSSSCP00000000978	Biglycan; May be involved in collagen fiber assembly.	Lumican.	0.617
BGN	OGN	ENSSSCP00000029666	ENSSSCP00000045106	Biglycan; May be involved in collagen fiber assembly.	Osteoglycin/mimecan.	0.572
COL1A2	BGN	ENSSSCP00000016253	ENSSSCP00000029666	Fibrillar collagen NC1 domain-containing protein.	Biglycan; May be involved in collagen fiber assembly.	0.832
COL1A2	COL3A1	ENSSSCP00000016253	ENSSSCP00000033771	Fibrillar collagen NC1 domain-containing protein.	Collagen alpha-1(III) chain preproprotein.	0.997
COL1A2	DCN	ENSSSCP00000016253	ENSSSCP00000000977	Fibrillar collagen NC1 domain-containing protein.	Decorin; May affect the rate of fibrils formation.	0.895
COL1A2	LOX	ENSSSCP00000016253	ENSSSCP00000015138	Fibrillar collagen NC1 domain-containing protein.	Protein-lysine 6-oxidase, short form; Responsible for the post-translational oxidative deamination of peptidyl lysine residues in precursors to fibrous collagen and elastin. Regulator of Ras expression. May play a role in tumor suppression. Plays a role in the aortic wall architecture (By similarity); Belongs to the lysyl oxidase family.	0.673
COL1A2	LUM	ENSSSCP00000016253	ENSSSCP00000000978	Fibrillar collagen NC1 domain-containing protein.	Lumican.	0.988
COL1A2	OGN	ENSSSCP00000016253	ENSSSCP00000045106	Fibrillar collagen NC1 domain-containing protein.	Osteoglycin/mimecan.	0.496
COL3A1	ASPN	ENSSSCP00000033771	ENSSSCP00000008621	Collagen alpha-1(III) chain preproprotein.	Asporin.	0.508
COL3A1	BGN	ENSSSCP00000033771	ENSSSCP00000029666	Collagen alpha-1(III) chain preproprotein.	Biglycan; May be involved in collagen fiber assembly.	0.711
COL3A1	COL1A2	ENSSSCP00000033771	ENSSSCP00000016253	Collagen alpha-1(III) chain preproprotein.	Fibrillar collagen NC1 domain-containing protein.	0.997
COL3A1	DCN	ENSSSCP00000033771	ENSSSCP00000000977	Collagen alpha-1(III) chain preproprotein.	Decorin; May affect the rate of fibrils formation.	0.937
COL3A1	LOX	ENSSSCP00000033771	ENSSSCP00000015138	Collagen alpha-1(III) chain preproprotein.	Protein-lysine 6-oxidase, short form; Responsible for the post-translational oxidative deamination of peptidyl lysine residues in precursors to fibrous collagen and elastin. Regulator of Ras expression. May play a role in tumor suppression. Plays a role in the aortic wall architecture (By similarity); Belongs to the lysyl oxidase family.	0.704