13 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SERPINA12	Serpin family A member 12; Belongs to the serpin family. (414 aa)
	EPB41L4B	Erythrocyte membrane protein band 4.1 like 4B. (895 aa)
	COL7A1	Uncharacterized protein. (2938 aa)
	MUC13	Uncharacterized protein. (537 aa)
	LRP5	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1614 aa)
	DNAH9	Dynein axonemal heavy chain 9. (4487 aa)
	ZNF641	Zinc finger protein 641. (548 aa)
	PFKM	ATP-dependent 6-phosphofructokinase, muscle type; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (810 aa)
	MUC20	Uncharacterized protein. (599 aa)
	DNAJC10	DnaJ heat shock protein family (Hsp40) member C10. (803 aa)
	COMMD5	COMM domain containing 5. (260 aa)
	NSMAF	Neutral sphingomyelinase activation associated factor. (923 aa)
	MUC4	Uncharacterized protein. (1173 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COL7A1	COMMD5	ENSSSCP00000012108	ENSSSCP00000040271	Uncharacterized protein.	COMM domain containing 5.	0.406
COMMD5	COL7A1	ENSSSCP00000040271	ENSSSCP00000012108	COMM domain containing 5.	Uncharacterized protein.	0.406
COMMD5	EPB41L4B	ENSSSCP00000040271	ENSSSCP00000005841	COMM domain containing 5.	Erythrocyte membrane protein band 4.1 like 4B.	0.567
COMMD5	SERPINA12	ENSSSCP00000040271	ENSSSCP00000002684	COMM domain containing 5.	Serpin family A member 12; Belongs to the serpin family.	0.546
COMMD5	ZNF641	ENSSSCP00000040271	ENSSSCP00000021970	COMM domain containing 5.	Zinc finger protein 641.	0.489
DNAH9	DNAJC10	ENSSSCP00000019091	ENSSSCP00000037219	Dynein axonemal heavy chain 9.	DnaJ heat shock protein family (Hsp40) member C10.	0.549
DNAH9	EPB41L4B	ENSSSCP00000019091	ENSSSCP00000005841	Dynein axonemal heavy chain 9.	Erythrocyte membrane protein band 4.1 like 4B.	0.422
DNAJC10	DNAH9	ENSSSCP00000037219	ENSSSCP00000019091	DnaJ heat shock protein family (Hsp40) member C10.	Dynein axonemal heavy chain 9.	0.549
DNAJC10	EPB41L4B	ENSSSCP00000037219	ENSSSCP00000005841	DnaJ heat shock protein family (Hsp40) member C10.	Erythrocyte membrane protein band 4.1 like 4B.	0.478
DNAJC10	ZNF641	ENSSSCP00000037219	ENSSSCP00000021970	DnaJ heat shock protein family (Hsp40) member C10.	Zinc finger protein 641.	0.441
EPB41L4B	COMMD5	ENSSSCP00000005841	ENSSSCP00000040271	Erythrocyte membrane protein band 4.1 like 4B.	COMM domain containing 5.	0.567
EPB41L4B	DNAH9	ENSSSCP00000005841	ENSSSCP00000019091	Erythrocyte membrane protein band 4.1 like 4B.	Dynein axonemal heavy chain 9.	0.422
EPB41L4B	DNAJC10	ENSSSCP00000005841	ENSSSCP00000037219	Erythrocyte membrane protein band 4.1 like 4B.	DnaJ heat shock protein family (Hsp40) member C10.	0.478
EPB41L4B	NSMAF	ENSSSCP00000005841	ENSSSCP00000042277	Erythrocyte membrane protein band 4.1 like 4B.	Neutral sphingomyelinase activation associated factor.	0.732
EPB41L4B	PFKM	ENSSSCP00000005841	ENSSSCP00000031307	Erythrocyte membrane protein band 4.1 like 4B.	ATP-dependent 6-phosphofructokinase, muscle type; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.556
EPB41L4B	SERPINA12	ENSSSCP00000005841	ENSSSCP00000002684	Erythrocyte membrane protein band 4.1 like 4B.	Serpin family A member 12; Belongs to the serpin family.	0.410
EPB41L4B	ZNF641	ENSSSCP00000005841	ENSSSCP00000021970	Erythrocyte membrane protein band 4.1 like 4B.	Zinc finger protein 641.	0.900
MUC13	MUC20	ENSSSCP00000012633	ENSSSCP00000033626	Uncharacterized protein.	Uncharacterized protein.	0.952
MUC13	MUC4	ENSSSCP00000012633	ENSSSCP00000051590	Uncharacterized protein.	Uncharacterized protein.	0.956
MUC20	MUC13	ENSSSCP00000033626	ENSSSCP00000012633	Uncharacterized protein.	Uncharacterized protein.	0.952