STRINGSTRING
RPLP1 RPLP1 COL5A1 COL5A1 COL12A1 COL12A1 CTBP2 CTBP2 ENC1 ENC1 COL1A2 COL1A2 PLD2 PLD2 COL3A1 COL3A1 GAPDH GAPDH PLD1 PLD1 COL4A5 COL4A5 GAS6 GAS6 RPL4 RPL4 COL6A1 COL6A1 COL1A1 COL1A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPLP160S acidic ribosomal protein P1; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
COL5A1Fibrillar collagen NC1 domain-containing protein. (1918 aa)
COL12A1Collagen type XII alpha 1 chain. (3065 aa)
CTBP2C-terminal binding protein 2. (982 aa)
ENC1Ectoderm-neural cortex protein 1 isoform X1. (589 aa)
COL1A2Fibrillar collagen NC1 domain-containing protein. (1135 aa)
PLD2Phospholipase. (933 aa)
COL3A1Collagen alpha-1(III) chain preproprotein. (1471 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...] (398 aa)
PLD1Phospholipase. (1074 aa)
COL4A5Collagen type IV alpha 5 chain. (1689 aa)
GAS6Uncharacterized protein. (682 aa)
RPL460S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family. (449 aa)
COL6A1Collagen type VI alpha 1 chain. (1028 aa)
COL1A1Collagen type I alpha 1 chain. (1477 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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