STRINGSTRING
RBBP4 RBBP4 RYBP RYBP SOX6 SOX6 EZH2 EZH2 TP53 TP53 ACAN ACAN NANOG NANOG COL1A1 COL1A1 P4HB P4HB SUZ12 SUZ12 CBX1 CBX1 COL1A2 COL1A2 MMP13 MMP13 MMP12 MMP12 BMI1 BMI1 MYCN MYCN S100A4 S100A4 COL10A1 COL10A1 GAPDHS GAPDHS SOX5 SOX5 KLF4 KLF4 MYC MYC ALCAM ALCAM YY1 YY1 SERPINH1 SERPINH1 GAPDH GAPDH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RBBP4WD_REPEATS_REGION domain-containing protein. (427 aa)
RYBPRING1 and YY1 binding protein. (273 aa)
SOX6SRY-box transcription factor 6. (859 aa)
EZH2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (762 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (442 aa)
ACANAggrecan core protein 2; This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region. May play a regulatory role in the matrix assembly of the cartilage. (2434 aa)
NANOGHomeobox domain-containing protein. (304 aa)
COL1A1Collagen type I alpha 1 chain. (1477 aa)
P4HBProtein disulfide-isomerase. (623 aa)
SUZ12SUZ12 polycomb repressive complex 2 subunit. (737 aa)
CBX1Chromobox 1. (185 aa)
COL1A2Fibrillar collagen NC1 domain-containing protein. (1135 aa)
MMP13Matrix metallopeptidase 13. (470 aa)
MMP12Macrophage metalloelastase preproprotein. (476 aa)
BMI1RING-type domain-containing protein. (336 aa)
MYCNMYCN proto-oncogene, bHLH transcription factor. (465 aa)
S100A4Protein S100; Belongs to the S-100 family. (101 aa)
COL10A1Type X collagen. (675 aa)
GAPDHSGlyceraldehyde-3-phosphate dehydrogenase. (403 aa)
SOX5SRY-box transcription factor 5. (763 aa)
KLF4Kruppel-like factor 4 isoform b. (510 aa)
MYCMyc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis. Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release (By similarity). (452 aa)
ALCAMActivated leukocyte cell adhesion molecule. (619 aa)
YY1YY1 transcription factor. (438 aa)
SERPINH1SERPIN domain-containing protein; Belongs to the serpin family. (418 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...] (398 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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