STRINGSTRING
FAH FAH GPC1 GPC1 FOXA1 FOXA1 FOXA2 FOXA2 HHEX HHEX GATA4 GATA4 MIXL1 MIXL1 TBX3 TBX3 MAB21L2 MAB21L2 SOX17 SOX17 ETV2 ETV2 HNF1B HNF1B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FAHFumarylacetoacetase. (480 aa)
GPC1Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (559 aa)
FOXA1Forkhead box A1. (468 aa)
FOXA2Hepatocyte nuclear factor 3-beta isoform 1. (463 aa)
HHEXHematopoietically-expressed homeobox protein HHEX. (269 aa)
GATA4Transcription factor GATA-4 isoform 2. (442 aa)
MIXL1Mix paired-like homeobox. (237 aa)
TBX3T-box transcription factor TBX3 isoform 2. (745 aa)
MAB21L2Protein mab-21-like 2. (359 aa)
SOX17SRY-box transcription factor 17. (407 aa)
ETV2ETS variant 2. (242 aa)
HNF1BHepatocyte nuclear factor 1-beta; Transcription factor, probably binds to the inverted palindrome 5'-GTTAATNATTAAC-3'. Binds to the PFC element in the UPA gene. (577 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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