28 items (Sus scrofa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Predicted Interactions

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Your Input:
	HDAC9	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1137 aa)
	RBM15	RNA binding motif protein 15. (1006 aa)
	ATOH8	Atonal bHLH transcription factor 8. (315 aa)
	ZC3H13	Zinc finger CCCH-type containing 13. (1640 aa)
	RBM15B	RNA binding motif protein 15B. (854 aa)
	KHDRBS1	KH RNA binding domain containing, signal transduction associated 1. (443 aa)
	IGF2BP2	Insulin like growth factor 2 mRNA binding protein 2. (592 aa)
	RBMX	RNA binding motif protein X-linked. (408 aa)
	YTHDF1	YTH N6-methyladenosine RNA binding protein 1. (652 aa)
	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...] (398 aa)
	ALKBH5	AlkB homolog 5, RNA demethylase. (394 aa)
	WTAP	Uncharacterized protein. (649 aa)
	HNRNPA2B1	Heterogeneous nuclear ribonucleoprotein A2/B1. (369 aa)
	SOX7	Transcription factor SOX-7. (389 aa)
	METTL16	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (561 aa)
	IGF2BP3	Insulin-like growth factor 2 mRNA-binding protein 3. (586 aa)
	METTL14	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family. (456 aa)
	FTO	FTO_NTD domain-containing protein. (509 aa)
	YTHDF3	YTH domain-containing family protein 3 isoform b. (588 aa)
	YTHDC2	YTH domain containing 2. (1430 aa)
	YTHDC1	YTH domain containing 1. (743 aa)
	RBM39	RNA-binding protein 39 isoform a. (530 aa)
	RAD50	Zinc-hook domain-containing protein. (1358 aa)
	MINDY4B	MINDY family member 4B. (458 aa)
	YTHDF2	YTH N6-methyladenosine RNA binding protein 2. (600 aa)
	ELOC	Elongin C; Belongs to the SKP1 family. (139 aa)
	ARGLU1	Arginine and glutamate rich 1. (279 aa)
	CMPK2	Cytidine/uridine monophosphate kinase 2. (449 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALKBH5	FTO	ENSSSCP00000038766	ENSSSCP00000047110	AlkB homolog 5, RNA demethylase.	FTO_NTD domain-containing protein.	0.979
ALKBH5	GAPDH	ENSSSCP00000038766	ENSSSCP00000035519	AlkB homolog 5, RNA demethylase.	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...]	0.570
ALKBH5	HNRNPA2B1	ENSSSCP00000038766	ENSSSCP00000040227	AlkB homolog 5, RNA demethylase.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.639
ALKBH5	IGF2BP2	ENSSSCP00000038766	ENSSSCP00000028307	AlkB homolog 5, RNA demethylase.	Insulin like growth factor 2 mRNA binding protein 2.	0.675
ALKBH5	IGF2BP3	ENSSSCP00000038766	ENSSSCP00000044238	AlkB homolog 5, RNA demethylase.	Insulin-like growth factor 2 mRNA-binding protein 3.	0.685
ALKBH5	METTL14	ENSSSCP00000038766	ENSSSCP00000046701	AlkB homolog 5, RNA demethylase.	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family.	0.953
ALKBH5	METTL16	ENSSSCP00000038766	ENSSSCP00000040541	AlkB homolog 5, RNA demethylase.	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]	0.731
ALKBH5	RBM15	ENSSSCP00000038766	ENSSSCP00000007262	AlkB homolog 5, RNA demethylase.	RNA binding motif protein 15.	0.853
ALKBH5	RBM15B	ENSSSCP00000038766	ENSSSCP00000012172	AlkB homolog 5, RNA demethylase.	RNA binding motif protein 15B.	0.817
ALKBH5	RBMX	ENSSSCP00000038766	ENSSSCP00000029555	AlkB homolog 5, RNA demethylase.	RNA binding motif protein X-linked.	0.475
ALKBH5	WTAP	ENSSSCP00000038766	ENSSSCP00000039764	AlkB homolog 5, RNA demethylase.	Uncharacterized protein.	0.975
ALKBH5	YTHDC1	ENSSSCP00000038766	ENSSSCP00000049284	AlkB homolog 5, RNA demethylase.	YTH domain containing 1.	0.874
ALKBH5	YTHDC2	ENSSSCP00000038766	ENSSSCP00000048904	AlkB homolog 5, RNA demethylase.	YTH domain containing 2.	0.858
ALKBH5	YTHDF1	ENSSSCP00000038766	ENSSSCP00000031181	AlkB homolog 5, RNA demethylase.	YTH N6-methyladenosine RNA binding protein 1.	0.917
ALKBH5	YTHDF2	ENSSSCP00000038766	ENSSSCP00000065604	AlkB homolog 5, RNA demethylase.	YTH N6-methyladenosine RNA binding protein 2.	0.913
ALKBH5	YTHDF3	ENSSSCP00000038766	ENSSSCP00000048507	AlkB homolog 5, RNA demethylase.	YTH domain-containing family protein 3 isoform b.	0.890
ALKBH5	ZC3H13	ENSSSCP00000038766	ENSSSCP00000010047	AlkB homolog 5, RNA demethylase.	Zinc finger CCCH-type containing 13.	0.855
FTO	ALKBH5	ENSSSCP00000047110	ENSSSCP00000038766	FTO_NTD domain-containing protein.	AlkB homolog 5, RNA demethylase.	0.979
FTO	GAPDH	ENSSSCP00000047110	ENSSSCP00000035519	FTO_NTD domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...]	0.446
FTO	HNRNPA2B1	ENSSSCP00000047110	ENSSSCP00000040227	FTO_NTD domain-containing protein.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.559