9 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VIRMA	Vir like m6A methyltransferase associated. (1812 aa)
	PCIF1	Phosphorylated CTD-interacting factor 1 isoform X1. (703 aa)
	ZC3H13	Zinc finger CCCH-type containing 13. (1640 aa)
	LOC100521680	Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...] (136 aa)
	A0A286ZTM7_PIG	Histone H3; Belongs to the histone H3 family. (136 aa)
	WTAP	Uncharacterized protein. (649 aa)
	ISG15	Ubiquitin-like modifier. (167 aa)
	METTL14	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family. (456 aa)
	HIST1H3E	Histone H3; Belongs to the histone H3 family. (136 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A286ZTM7_PIG	HIST1H3E	ENSSSCP00000034926	ENSSSCP00000053406	Histone H3; Belongs to the histone H3 family.	Histone H3; Belongs to the histone H3 family.	0.953
A0A286ZTM7_PIG	ISG15	ENSSSCP00000034926	ENSSSCP00000041015	Histone H3; Belongs to the histone H3 family.	Ubiquitin-like modifier.	0.443
A0A286ZTM7_PIG	LOC100521680	ENSSSCP00000034926	ENSSSCP00000018225	Histone H3; Belongs to the histone H3 family.	Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...]	0.900
HIST1H3E	A0A286ZTM7_PIG	ENSSSCP00000053406	ENSSSCP00000034926	Histone H3; Belongs to the histone H3 family.	Histone H3; Belongs to the histone H3 family.	0.953
HIST1H3E	ISG15	ENSSSCP00000053406	ENSSSCP00000041015	Histone H3; Belongs to the histone H3 family.	Ubiquitin-like modifier.	0.443
HIST1H3E	LOC100521680	ENSSSCP00000053406	ENSSSCP00000018225	Histone H3; Belongs to the histone H3 family.	Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...]	0.953
ISG15	A0A286ZTM7_PIG	ENSSSCP00000041015	ENSSSCP00000034926	Ubiquitin-like modifier.	Histone H3; Belongs to the histone H3 family.	0.443
ISG15	HIST1H3E	ENSSSCP00000041015	ENSSSCP00000053406	Ubiquitin-like modifier.	Histone H3; Belongs to the histone H3 family.	0.443
ISG15	LOC100521680	ENSSSCP00000041015	ENSSSCP00000018225	Ubiquitin-like modifier.	Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...]	0.442
LOC100521680	A0A286ZTM7_PIG	ENSSSCP00000018225	ENSSSCP00000034926	Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...]	Histone H3; Belongs to the histone H3 family.	0.900
LOC100521680	HIST1H3E	ENSSSCP00000018225	ENSSSCP00000053406	Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...]	Histone H3; Belongs to the histone H3 family.	0.953
LOC100521680	ISG15	ENSSSCP00000018225	ENSSSCP00000041015	Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...]	Ubiquitin-like modifier.	0.442
METTL14	VIRMA	ENSSSCP00000046701	ENSSSCP00000006511	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family.	Vir like m6A methyltransferase associated.	0.997
METTL14	WTAP	ENSSSCP00000046701	ENSSSCP00000039764	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family.	Uncharacterized protein.	0.999
METTL14	ZC3H13	ENSSSCP00000046701	ENSSSCP00000010047	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family.	Zinc finger CCCH-type containing 13.	0.988
VIRMA	METTL14	ENSSSCP00000006511	ENSSSCP00000046701	Vir like m6A methyltransferase associated.	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family.	0.997
VIRMA	WTAP	ENSSSCP00000006511	ENSSSCP00000039764	Vir like m6A methyltransferase associated.	Uncharacterized protein.	0.999
VIRMA	ZC3H13	ENSSSCP00000006511	ENSSSCP00000010047	Vir like m6A methyltransferase associated.	Zinc finger CCCH-type containing 13.	0.999
WTAP	METTL14	ENSSSCP00000039764	ENSSSCP00000046701	Uncharacterized protein.	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family.	0.999
WTAP	VIRMA	ENSSSCP00000039764	ENSSSCP00000006511	Uncharacterized protein.	Vir like m6A methyltransferase associated.	0.999