STRINGSTRING
COL11A1 COL11A1 COL12A1 COL12A1 MMP27 MMP27 MMP8 MMP8 MMP1 MMP1 MMP13 MMP13 COL1A2 COL1A2 COL25A1 COL25A1 COL3A1 COL3A1 COL2A1 COL2A1 TIMP3 TIMP3 COL8A2 COL8A2 MMP16 MMP16 MMP24 MMP24 MMP28 MMP28 MMP9 MMP9 TIMP4 TIMP4 MMP15 MMP15 COL9A1 COL9A1 COL14A1 COL14A1 COL9A2 COL9A2 COL1A1 COL1A1 TIMP2 TIMP2 DEPTOR DEPTOR COL8A1 COL8A1 COL6A6 COL6A6 COL13A1 COL13A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL11A1Collagen type XI alpha 1 chain. (1816 aa)
COL12A1Collagen type XII alpha 1 chain. (3065 aa)
MMP27Matrix metallopeptidase 27. (511 aa)
MMP8Matrix metallopeptidase 8. (468 aa)
MMP1Stromelysin-1 preproprotein. (477 aa)
MMP13Matrix metallopeptidase 13. (470 aa)
COL1A2Fibrillar collagen NC1 domain-containing protein. (1135 aa)
COL25A1Collagen type XXV alpha 1 chain. (695 aa)
COL3A1Collagen alpha-1(III) chain preproprotein. (1471 aa)
COL2A1Collagen type II alpha 1 chain. (1486 aa)
TIMP3TIMP metallopeptidase inhibitor 3. (211 aa)
COL8A2Collagen type VIII alpha 2 chain. (707 aa)
MMP16Matrix metalloproteinase-16. (607 aa)
MMP24Matrix metallopeptidase 24. (635 aa)
MMP28Matrix metallopeptidase 28. (521 aa)
MMP9Matrix metalloproteinase-9. (708 aa)
TIMP4TIMP metallopeptidase inhibitor 4. (224 aa)
MMP15Matrix metallopeptidase 15. (712 aa)
COL9A1Collagen type IX alpha 1 chain. (922 aa)
COL14A1Collagen alpha-1(XIV) chain isoform X1. (1796 aa)
COL9A2Uncharacterized protein. (709 aa)
COL1A1Collagen type I alpha 1 chain. (1477 aa)
TIMP2Uncharacterized protein. (257 aa)
DEPTORDEP domain-containing mTOR-interacting protein isoform 1. (409 aa)
COL8A1Collagen type VIII alpha 1 chain. (759 aa)
COL6A6Collagen type VI alpha 6 chain. (2266 aa)
COL13A1Collagen type XIII alpha 1 chain. (726 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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