(39 nodes) Immunoglobulin C-Type network (Sus scrofa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MR1	Major histocompatibility complex, class I-related; Belongs to the MHC class I family. (347 aa)
	TRIM52	Ig-like domain-containing protein; Belongs to the MHC class I family. (359 aa)
	SLA-DQB1	SLA class II histocompatibility antigen, DQ haplotype C beta chain. (271 aa)
	A0A287BQ31_PIG	Ig-like domain-containing protein. (180 aa)
	LAC_PIG	Ig lambda chain C region. (380 aa)
	HFE	Homeostatic iron regulator; Belongs to the MHC class I family. (395 aa)
	SLA-DRB1	Ig-like domain-containing protein. (307 aa)
	SLA-2	Ig-like domain-containing protein; Belongs to the MHC class I family. (394 aa)
	HLA-DRA	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family. (252 aa)
	HLA-DOB	HLA class II histocompatibility antigen, DO beta chain. (277 aa)
	SLA-DMB	Major histocompatibility complex, class II, DM beta. (272 aa)
	SLA-DOA	Ig-like domain-containing protein; Belongs to the MHC class II family. (360 aa)
	FCGRT	Fc fragment of IgG receptor and transporter. (434 aa)
	LOC100626120	Uncharacterized protein. (342 aa)
	LOC100523213	Ig-like domain-containing protein. (212 aa)
	F6Q8R7_PIG	Ig-like domain-containing protein. (311 aa)
	SIRPA	Uncharacterized protein. (533 aa)
	I3LPP0_PIG	Ig-like domain-containing protein. (338 aa)
	CD1.1	T-cell surface glycoprotein CD1a; Antigen-presenting protein that binds self and non-self lipid and glycolipid antigens and presents them to T-cell receptors on natural killer T-cells. (339 aa)
	CD1E	CD1e molecule. (385 aa)
	B2M	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity). (157 aa)
	CD1D	Ig-like domain-containing protein. (463 aa)
	K7GNK3_PIG	Ig-like domain-containing protein; Belongs to the MHC class I family. (349 aa)
	SLA-DQA1	SLA class II histocompatibility antigen, DQ haplotype D alpha chain. (255 aa)
	K7GSB8_PIG	Ig-like domain-containing protein. (331 aa)
	SLA-DMA	Ig-like domain-containing protein; Belongs to the MHC class II family. (290 aa)
	SLA-11	Histocompatibility antigen, class I; Belongs to the MHC class I family. (369 aa)
	A0A287ANX9_PIG	Uncharacterized protein. (472 aa)
	SLA-8	Ig-like domain-containing protein; Belongs to the MHC class I family. (434 aa)
	A0A287B199_PIG	Ig-like domain-containing protein. (313 aa)
	A0A286ZJL9_PIG	Uncharacterized protein. (498 aa)
	A0A286ZKB7_PIG	Ig-like domain-containing protein. (259 aa)
	A0A286ZL89_PIG	Uncharacterized protein. (342 aa)
	A0A286ZTC9_PIG	Uncharacterized protein. (647 aa)
	A0A287A4Y3_PIG	Ig-like domain-containing protein. (226 aa)
	TAPBPL	TAP binding protein like. (441 aa)
	SLA-6	Ig-like domain-containing protein; Belongs to the MHC class I family. (462 aa)
	LOC102161654	Uncharacterized protein. (390 aa)
	A0A287AAB9_PIG	Ig-like domain-containing protein. (252 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A286ZJL9_PIG	A0A286ZKB7_PIG	ENSSSCP00000031778	ENSSSCP00000031912	Uncharacterized protein.	Ig-like domain-containing protein.	0.525
A0A286ZJL9_PIG	A0A286ZL89_PIG	ENSSSCP00000031778	ENSSSCP00000032230	Uncharacterized protein.	Uncharacterized protein.	0.449
A0A286ZJL9_PIG	A0A286ZTC9_PIG	ENSSSCP00000031778	ENSSSCP00000034898	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A286ZJL9_PIG	A0A287A4Y3_PIG	ENSSSCP00000031778	ENSSSCP00000038998	Uncharacterized protein.	Ig-like domain-containing protein.	0.876
A0A286ZJL9_PIG	A0A287AAB9_PIG	ENSSSCP00000031778	ENSSSCP00000040841	Uncharacterized protein.	Ig-like domain-containing protein.	0.525
A0A286ZJL9_PIG	A0A287BQ31_PIG	ENSSSCP00000031778	ENSSSCP00000058284	Uncharacterized protein.	Ig-like domain-containing protein.	0.703
A0A286ZJL9_PIG	B2M	ENSSSCP00000031778	ENSSSCP00000050390	Uncharacterized protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	0.437
A0A286ZJL9_PIG	FCGRT	ENSSSCP00000031778	ENSSSCP00000003457	Uncharacterized protein.	Fc fragment of IgG receptor and transporter.	0.603
A0A286ZJL9_PIG	HLA-DOB	ENSSSCP00000031778	ENSSSCP00000001577	Uncharacterized protein.	HLA class II histocompatibility antigen, DO beta chain.	0.502
A0A286ZJL9_PIG	I3LPP0_PIG	ENSSSCP00000031778	ENSSSCP00000026067	Uncharacterized protein.	Ig-like domain-containing protein.	0.429
A0A286ZJL9_PIG	LAC_PIG	ENSSSCP00000031778	ENSSSCP00000058189	Uncharacterized protein.	Ig lambda chain C region.	0.941
A0A286ZJL9_PIG	LOC100523213	ENSSSCP00000031778	ENSSSCP00000010750	Uncharacterized protein.	Ig-like domain-containing protein.	0.972
A0A286ZJL9_PIG	SLA-DRB1	ENSSSCP00000031778	ENSSSCP00000055121	Uncharacterized protein.	Ig-like domain-containing protein.	0.525
A0A286ZKB7_PIG	A0A286ZJL9_PIG	ENSSSCP00000031912	ENSSSCP00000031778	Ig-like domain-containing protein.	Uncharacterized protein.	0.525
A0A286ZKB7_PIG	A0A287AAB9_PIG	ENSSSCP00000031912	ENSSSCP00000040841	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.552
A0A286ZKB7_PIG	A0A287BQ31_PIG	ENSSSCP00000031912	ENSSSCP00000058284	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.740
A0A286ZKB7_PIG	B2M	ENSSSCP00000031912	ENSSSCP00000050390	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	0.589
A0A286ZKB7_PIG	HLA-DOB	ENSSSCP00000031912	ENSSSCP00000001577	Ig-like domain-containing protein.	HLA class II histocompatibility antigen, DO beta chain.	0.579
A0A286ZKB7_PIG	HLA-DRA	ENSSSCP00000031912	ENSSSCP00000001567	Ig-like domain-containing protein.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.874
A0A286ZKB7_PIG	SLA-DMA	ENSSSCP00000031912	ENSSSCP00000030928	Ig-like domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.763