(4 nodes) Class II histocompatibility antigen, alpha domain network (Sus scrofa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLA-DMA	Ig-like domain-containing protein; Belongs to the MHC class II family. (290 aa)
	HLA-DRA	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family. (252 aa)
	SLA-DOA	Ig-like domain-containing protein; Belongs to the MHC class II family. (360 aa)
	SLA-DQA1	SLA class II histocompatibility antigen, DQ haplotype D alpha chain. (255 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HLA-DRA	SLA-DMA	ENSSSCP00000001567	ENSSSCP00000030928	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.991
HLA-DRA	SLA-DOA	ENSSSCP00000001567	ENSSSCP00000001596	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.789
HLA-DRA	SLA-DQA1	ENSSSCP00000001567	ENSSSCP00000070034	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	0.884
SLA-DMA	HLA-DRA	ENSSSCP00000030928	ENSSSCP00000001567	Ig-like domain-containing protein; Belongs to the MHC class II family.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.991
SLA-DMA	SLA-DOA	ENSSSCP00000030928	ENSSSCP00000001596	Ig-like domain-containing protein; Belongs to the MHC class II family.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.859
SLA-DMA	SLA-DQA1	ENSSSCP00000030928	ENSSSCP00000070034	Ig-like domain-containing protein; Belongs to the MHC class II family.	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	0.789
SLA-DOA	HLA-DRA	ENSSSCP00000001596	ENSSSCP00000001567	Ig-like domain-containing protein; Belongs to the MHC class II family.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.789
SLA-DOA	SLA-DMA	ENSSSCP00000001596	ENSSSCP00000030928	Ig-like domain-containing protein; Belongs to the MHC class II family.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.859
SLA-DOA	SLA-DQA1	ENSSSCP00000001596	ENSSSCP00000070034	Ig-like domain-containing protein; Belongs to the MHC class II family.	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	0.584
SLA-DQA1	HLA-DRA	ENSSSCP00000070034	ENSSSCP00000001567	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.884
SLA-DQA1	SLA-DMA	ENSSSCP00000070034	ENSSSCP00000030928	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.789
SLA-DQA1	SLA-DOA	ENSSSCP00000070034	ENSSSCP00000001596	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.584