11 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KCNK9	Potassium channel subfamily K member. (374 aa)
	KCNK10	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (538 aa)
	KCNK6	Potassium two pore domain channel subfamily K member 6; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (495 aa)
	KCNK17	Potassium two pore domain channel subfamily K member 17; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (326 aa)
	KCNK13	Potassium two pore domain channel subfamily K member 13; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (410 aa)
	KCNK1	Potassium channel subfamily K member. (336 aa)
	KCNK7	Potassium channel subfamily K member. (307 aa)
	KCNK4	Potassium two pore domain channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (394 aa)
	KCNK3	Potassium channel subfamily K member. (401 aa)
	KCNK2	Potassium two pore domain channel subfamily K member 2; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (452 aa)
	KCNK16	Potassium two pore domain channel subfamily K member 16; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (294 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KCNK1	KCNK10	ENSSSCP00000010841	ENSSSCP00000043680	Potassium channel subfamily K member.	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.663
KCNK1	KCNK13	ENSSSCP00000010841	ENSSSCP00000002633	Potassium channel subfamily K member.	Potassium two pore domain channel subfamily K member 13; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.547
KCNK1	KCNK16	ENSSSCP00000010841	ENSSSCP00000039490	Potassium channel subfamily K member.	Potassium two pore domain channel subfamily K member 16; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.546
KCNK1	KCNK17	ENSSSCP00000010841	ENSSSCP00000001726	Potassium channel subfamily K member.	Potassium two pore domain channel subfamily K member 17; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.618
KCNK1	KCNK2	ENSSSCP00000010841	ENSSSCP00000036710	Potassium channel subfamily K member.	Potassium two pore domain channel subfamily K member 2; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.704
KCNK1	KCNK3	ENSSSCP00000010841	ENSSSCP00000032940	Potassium channel subfamily K member.	Potassium channel subfamily K member.	0.610
KCNK1	KCNK4	ENSSSCP00000010841	ENSSSCP00000013858	Potassium channel subfamily K member.	Potassium two pore domain channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.574
KCNK1	KCNK6	ENSSSCP00000010841	ENSSSCP00000048359	Potassium channel subfamily K member.	Potassium two pore domain channel subfamily K member 6; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.514
KCNK1	KCNK7	ENSSSCP00000010841	ENSSSCP00000013810	Potassium channel subfamily K member.	Potassium channel subfamily K member.	0.499
KCNK1	KCNK9	ENSSSCP00000010841	ENSSSCP00000049539	Potassium channel subfamily K member.	Potassium channel subfamily K member.	0.564
KCNK10	KCNK1	ENSSSCP00000043680	ENSSSCP00000010841	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member.	0.663
KCNK10	KCNK13	ENSSSCP00000043680	ENSSSCP00000002633	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium two pore domain channel subfamily K member 13; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.573
KCNK10	KCNK16	ENSSSCP00000043680	ENSSSCP00000039490	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium two pore domain channel subfamily K member 16; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.533
KCNK10	KCNK17	ENSSSCP00000043680	ENSSSCP00000001726	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium two pore domain channel subfamily K member 17; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.522
KCNK10	KCNK2	ENSSSCP00000043680	ENSSSCP00000036710	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium two pore domain channel subfamily K member 2; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.923
KCNK10	KCNK3	ENSSSCP00000043680	ENSSSCP00000032940	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member.	0.587
KCNK10	KCNK4	ENSSSCP00000043680	ENSSSCP00000013858	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium two pore domain channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.476
KCNK10	KCNK6	ENSSSCP00000043680	ENSSSCP00000048359	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium two pore domain channel subfamily K member 6; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.545
KCNK10	KCNK7	ENSSSCP00000043680	ENSSSCP00000013810	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member.	0.600
KCNK10	KCNK9	ENSSSCP00000043680	ENSSSCP00000049539	Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member.	0.564