STRINGSTRING
COL6A5 COL6A5 COL11A2 COL11A2 COL19A1 COL19A1 COL6A1 COL6A1 COL1A1 COL1A1 COL8A1 COL8A1 COL6A6 COL6A6 COL11A1 COL11A1 COL13A1 COL13A1 MMP2 MMP2 COL10A1 COL10A1 COL12A1 COL12A1 COL15A1 COL15A1 COL5A1 COL5A1 COL4A2 COL4A2 MMP11 MMP11 COL7A1 COL7A1 COL4A6 COL4A6 COL5A3 COL5A3 MMP7 MMP7 MMP20 MMP20 MMP8 MMP8 MMP12 MMP12 MMP13 MMP13 COL1A2 COL1A2 PRSS2 PRSS2 TMPRSS6 TMPRSS6 CTSB CTSB COL6A2 COL6A2 COL6A3 COL6A3 COL18A1 COL18A1 COL25A1 COL25A1 COL2A1 COL2A1 COL8A2 COL8A2 PHYKPL PHYKPL MMP9 MMP9 MMP15 MMP15 FURIN FURIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL6A5Collagen type VI alpha 5 chain. (2337 aa)
COL11A2Collagen type XI alpha 2 chain. (1796 aa)
COL19A1Collagen type XIX alpha 1 chain. (1132 aa)
COL6A1Collagen type VI alpha 1 chain. (1028 aa)
COL1A1Collagen type I alpha 1 chain. (1477 aa)
COL8A1Collagen type VIII alpha 1 chain. (759 aa)
COL6A6Collagen type VI alpha 6 chain. (2266 aa)
COL11A1Collagen type XI alpha 1 chain. (1816 aa)
COL13A1Collagen type XIII alpha 1 chain. (726 aa)
MMP2Uncharacterized protein. (610 aa)
COL10A1Type X collagen. (675 aa)
COL12A1Collagen type XII alpha 1 chain. (3065 aa)
COL15A1Collagen type XV alpha 1 chain. (1359 aa)
COL5A1Fibrillar collagen NC1 domain-containing protein. (1918 aa)
COL4A2Collagen type IV alpha 2 chain. (1712 aa)
MMP11Stromelysin-3 preproprotein. (463 aa)
COL7A1Uncharacterized protein. (2938 aa)
COL4A6Collagen type IV alpha 6 chain. (1547 aa)
COL5A3Collagen type V alpha 3 chain. (1747 aa)
MMP7ZnMc domain-containing protein. (267 aa)
MMP20Matrix metalloproteinase-20; Degrades amelogenin, the major protein component of the enamel matrix and two of the macromolecules characterizing the cartilage extracellular matrix: aggrecan and the cartilage oligomeric matrix protein (COMP). May play a central role in tooth enamel formation (By similarity). (483 aa)
MMP8Matrix metallopeptidase 8. (468 aa)
MMP12Macrophage metalloelastase preproprotein. (476 aa)
MMP13Matrix metallopeptidase 13. (470 aa)
COL1A2Fibrillar collagen NC1 domain-containing protein. (1135 aa)
PRSS2Putative trypsinogen; Belongs to the peptidase S1 family. (247 aa)
TMPRSS6Transmembrane serine protease 6; Belongs to the peptidase S1 family. (812 aa)
CTSBCathepsin B heavy chain; Thiol protease which is believed to participate in intracellular degradation and turnover of proteins (By similarity). Cleaves matrix extracellular phosphoglycoprotein MEPE (By similarity). Involved in the solubilization of cross-linked TG/thyroglobulin in the thyroid follicle lumen (By similarity). Has also been implicated in tumor invasion and metastasis (By similarity). (416 aa)
COL6A2Collagen type VI alpha 2 chain. (943 aa)
COL6A3Collagen type VI alpha 3 chain. (2911 aa)
COL18A1Collagen type XVIII alpha 1 chain. (1755 aa)
COL25A1Collagen type XXV alpha 1 chain. (695 aa)
COL2A1Collagen type II alpha 1 chain. (1486 aa)
COL8A2Collagen type VIII alpha 2 chain. (707 aa)
PHYKPL5-phosphohydroxy-L-lysine phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (479 aa)
MMP9Matrix metalloproteinase-9. (708 aa)
MMP15Matrix metallopeptidase 15. (712 aa)
FURINFurin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. (797 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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