STRINGSTRING
COL5A1 COL5A1 VCAM1 VCAM1 ITGAM ITGAM ITGAL ITGAL SPP1 SPP1 COL4A2 COL4A2 ITGA8 ITGA8 ITGA9 ITGA9 COL7A1 COL7A1 COL4A6 COL4A6 CD44 CD44 ICAM5 ICAM5 ICAM4 ICAM4 COL13A1 COL13A1 COL5A3 COL5A3 COMP COMP COL1A2 COL1A2 FN1 FN1 ITGA2 ITGA2 ERN1 ERN1 VTN VTN FGG FGG COL6A2 COL6A2 COL6A3 COL6A3 ITGA3 ITGA3 ICAM1 ICAM1 ICAM3 ICAM3 ITGAV ITGAV COL18A1 COL18A1 JAM2 JAM2 ITGAE ITGAE COL16A1 COL16A1 COL2A1 COL2A1 MADCAM1 MADCAM1 ITGA10 ITGA10 ITGA4 ITGA4 COL9A3 COL9A3 COL8A2 COL8A2 ITGB7 ITGB7 PECAM1 PECAM1 ITGB8 ITGB8 COL4A4 COL4A4 ITGB5 ITGB5 ITGA11 ITGA11 COL6A5 COL6A5 CDH1 CDH1 COL9A1 COL9A1 CD47 CD47 COL9A2 COL9A2 COL6A1 COL6A1 COL1A1 COL1A1 ITGA1 ITGA1 JAM3 JAM3 F11R F11R COL8A1 COL8A1 ITGB3 ITGB3 COL6A6 COL6A6 ITGA5 ITGA5 LUM LUM THBS1 THBS1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL5A1Fibrillar collagen NC1 domain-containing protein. (1918 aa)
VCAM1Uncharacterized protein. (537 aa)
ITGAMIntegrin subunit alpha M; Belongs to the integrin alpha chain family. (1272 aa)
ITGALIntegrin subunit alpha L; Belongs to the integrin alpha chain family. (1235 aa)
SPP1Osteopontin; Binds tightly to hydroxyapatite. Appears to form an integral part of the mineralized matrix. Probably important to cell-matrix interaction; Belongs to the osteopontin family. (303 aa)
COL4A2Collagen type IV alpha 2 chain. (1712 aa)
ITGA8Integrin subunit alpha 8; Belongs to the integrin alpha chain family. (1062 aa)
ITGA9Integrin subunit alpha 9; Belongs to the integrin alpha chain family. (1035 aa)
COL7A1Uncharacterized protein. (2938 aa)
COL4A6Collagen type IV alpha 6 chain. (1547 aa)
CD44CD44 molecule (Indian blood group). (767 aa)
ICAM5Intercellular adhesion molecule 5. (922 aa)
ICAM4ICAM_N domain-containing protein. (272 aa)
COL13A1Collagen type XIII alpha 1 chain. (726 aa)
COL5A3Collagen type V alpha 3 chain. (1747 aa)
COMPCartilage oligomeric matrix protein. (756 aa)
COL1A2Fibrillar collagen NC1 domain-containing protein. (1135 aa)
FN1Fibronectin 1. (2462 aa)
ITGA2Integrin subunit alpha 2; Belongs to the integrin alpha chain family. (1178 aa)
ERN1Uncharacterized protein. (1029 aa)
VTNVitronectin; Vitronectin is a cell adhesion and spreading factor found in serum and tissues. Vitronectin interact with glycosaminoglycans and proteoglycans. Is recognized by certain members of the integrin family and serves as a cell-to-substrate adhesion molecule. Inhibitor of the membrane-damaging effect of the terminal cytolytic complement pathway (By similarity). (523 aa)
FGGFibrinogen gamma chain. (454 aa)
COL6A2Collagen type VI alpha 2 chain. (943 aa)
COL6A3Collagen type VI alpha 3 chain. (2911 aa)
ITGA3Integrin subunit alpha 3; Belongs to the integrin alpha chain family. (1085 aa)
ICAM1Intercellular adhesion molecule 1. (537 aa)
ICAM3ICAM_N domain-containing protein. (416 aa)
ITGAVIntegrin subunit alpha V; Belongs to the integrin alpha chain family. (1052 aa)
COL18A1Collagen type XVIII alpha 1 chain. (1755 aa)
JAM2Junctional adhesion molecule 2. (307 aa)
ITGAEIntegrin subunit alpha E; Belongs to the integrin alpha chain family. (1168 aa)
COL16A1Collagen alpha-1(XVI) chain isoform X2. (1624 aa)
COL2A1Collagen type II alpha 1 chain. (1486 aa)
MADCAM1Mucosal addressin cell adhesion molecule 1 isoform a. (390 aa)
ITGA10Integrin subunit alpha 10; Belongs to the integrin alpha chain family. (1352 aa)
ITGA4Integrin subunit alpha 4; Belongs to the integrin alpha chain family. (1055 aa)
COL9A3Collagen type IX alpha 3 chain. (684 aa)
COL8A2Collagen type VIII alpha 2 chain. (707 aa)
ITGB7Integrin beta; Belongs to the integrin beta chain family. (882 aa)
PECAM1Platelet endothelial cell adhesion molecule; Cell adhesion molecule which is required for leukocyte transendothelial migration (TEM) under most inflammatory conditions. Tyr-692 plays a critical role in TEM and is required for efficient trafficking of PECAM1 to and from the lateral border recycling compartment (LBRC) and is also essential for the LBRC membrane to be targeted around migrating leukocytes. Trans-homophilic interaction may play a role in endothelial cell-cell adhesion via cell junctions. Heterophilic interaction with CD177 plays a role in transendothelial migration of neutr [...] (740 aa)
ITGB8Integrin beta; Belongs to the integrin beta chain family. (722 aa)
COL4A4Collagen type IV alpha 4 chain. (1691 aa)
ITGB5Integrin beta; Belongs to the integrin beta chain family. (800 aa)
ITGA11Integrin subunit alpha 11; Belongs to the integrin alpha chain family. (1282 aa)
COL6A5Collagen type VI alpha 5 chain. (2337 aa)
CDH1Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (925 aa)
COL9A1Collagen type IX alpha 1 chain. (922 aa)
CD47Leukocyte surface antigen CD47; Receptor for SIRPA, binding to which prevents maturation of immature dendritic cells and inhibits cytokine production by mature dendritic cells. Interaction with SIRPG mediates cell-cell adhesion, enhances superantigen-dependent T-cell-mediated proliferation and costimulates T-cell activation. Plays an important role in memory formation and synaptic plasticity in the hippocampus. May play a role in membrane transport and/or integrin dependent signal transduction. May prevent premature elimination of red blood cells. May be involved in membrane permeabili [...] (340 aa)
COL9A2Uncharacterized protein. (709 aa)
COL6A1Collagen type VI alpha 1 chain. (1028 aa)
COL1A1Collagen type I alpha 1 chain. (1477 aa)
ITGA1Integrin subunit alpha 1; Belongs to the integrin alpha chain family. (1175 aa)
JAM3Junctional adhesion molecule 3. (360 aa)
F11RUncharacterized protein. (347 aa)
COL8A1Collagen type VIII alpha 1 chain. (759 aa)
ITGB3Integrin beta; Belongs to the integrin beta chain family. (835 aa)
COL6A6Collagen type VI alpha 6 chain. (2266 aa)
ITGA5Integrin subunit alpha 5; Belongs to the integrin alpha chain family. (1057 aa)
LUMLumican. (341 aa)
THBS1Uncharacterized protein. (1170 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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