STRINGSTRING
LMNB1 LMNB1 CDC23 CDC23 EED EED MAPKAPK2 MAPKAPK2 POT1 POT1 CBX4 CBX4 LOC100521680 LOC100521680 MAP2K6 MAP2K6 SUZ12 SUZ12 ANAPC7 ANAPC7 EP400 EP400 I3LAJ9_PIG I3LAJ9_PIG PHC1 PHC1 CDK4 CDK4 ANAPC4 ANAPC4 HIST1H2BD HIST1H2BD PHC2 PHC2 LOC100158121 LOC100158121 CBX2 CBX2 LOC100621389 LOC100621389 MAPK10 MAPK10 CDK6 CDK6 MAPK11 MAPK11 HMGA1 HMGA1 UBE2S UBE2S P14ARF P14ARF A0A286ZRB3_PIG A0A286ZRB3_PIG HIRA HIRA MAP3K5 MAP3K5 CBX6 CBX6 MAP2K3 MAP2K3 RPS6KA2 RPS6KA2 ANAPC1 ANAPC1 CDC26 CDC26 H1-4 H1-4 ETS2 ETS2 UBE2D1 UBE2D1 H2BC11 H2BC11 MAPKAPK3 MAPKAPK3 ID1 ID1 CDKN1C CDKN1C RNF2 RNF2 RPS6KA1 RPS6KA1 MAPK7 MAPK7 TERF1 TERF1 CDKN1B CDKN1B H2AJ H2AJ CEBPB CEBPB PHC3 PHC3 EZH2 EZH2 ACD ACD RPS27A RPS27A CDK2 CDK2 LOC100152135 LOC100152135 LOC100152878 LOC100152878 EHMT2 EHMT2 RING1 RING1 CDKN1A CDKN1A TINF2 TINF2 TERF2IP TERF2IP TERF2 TERF2 CCNE1 CCNE1 CDKN2C CDKN2C SCMH1 SCMH1 ASF1A ASF1A CDKN2B CDKN2B CCNE2 CCNE2 H2AC20 H2AC20 LOC102159655 LOC102159655 UBE2C UBE2C UBN1 UBN1 MAP4K4 MAP4K4 F1RWC9_PIG F1RWC9_PIG H2AFZ H2AFZ CCNA1 CCNA1 RB1 RB1 ANAPC5 ANAPC5 MAPKAPK5 MAPKAPK5 LOC100155267 LOC100155267 MAPK8 MAPK8 BMI1 BMI1 MAP2K7 MAP2K7 KXD1 KXD1 RPS6KA3 RPS6KA3 MAP2K4 MAP2K4 CDC16 CDC16 H2AZ2 H2AZ2 MAPK1 MAPK1 RBBP7 RBBP7 H2BU1 H2BU1 NBN NBN ANAPC15 ANAPC15 TP53 TP53 FZR1 FZR1 ANAPC2 ANAPC2 H2AC6 H2AC6 TNIK TNIK HIST1H3E HIST1H3E A0A287BCA6_PIG A0A287BCA6_PIG LOC102160336 LOC102160336 LOC100620620 LOC100620620 MRE11 MRE11 H2BC21 H2BC21 EHMT1 EHMT1 CDC27 CDC27 CABIN1 CABIN1 KDM6B KDM6B CBX8 CBX8 MAPK3 MAPK3 RAD50 RAD50 H1-0 H1-0 ANAPC16 ANAPC16 H2AX H2AX MAPK9 MAPK9 HMGA2 HMGA2 ETS1 ETS1 UBC UBC MAPK14 MAPK14 ANAPC11 ANAPC11 KAT5 KAT5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LMNB1Lamin-B1 isoform 1; Belongs to the intermediate filament family. (586 aa)
CDC23Cell division cycle protein 23 homolog. (594 aa)
EEDEmbryonic ectoderm development. (466 aa)
MAPKAPK2MAPK activated protein kinase 2; Belongs to the protein kinase superfamily. (361 aa)
POT1Protection of telomeres 1. (813 aa)
CBX4Chromobox 4. (547 aa)
LOC100521680Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...] (136 aa)
MAP2K6Mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily. (339 aa)
SUZ12SUZ12 polycomb repressive complex 2 subunit. (737 aa)
ANAPC7Anaphase promoting complex subunit 7. (597 aa)
EP400E1A binding protein p400. (3210 aa)
I3LAJ9_PIGHistone H2B; Belongs to the histone H2B family. (168 aa)
PHC1Uncharacterized protein. (1001 aa)
CDK4Cyclin-dependent kinase 4; Ser/Thr-kinase component of cyclin D-CDK4 (DC) complexes that phosphorylate and inhibit members of the retinoblastoma (RB) protein family including RB1 and regulate the cell-cycle during G(1)/S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB/E2F complexes and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. [...] (303 aa)
ANAPC4Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family. (809 aa)
HIST1H2BDHistone H2B; Belongs to the histone H2B family. (126 aa)
PHC2Polyhomeotic-like protein 2 isoform a. (887 aa)
LOC100158121Histone H2A; Belongs to the histone H2A family. (130 aa)
CBX2Chromobox protein homolog 2 isoform X1. (531 aa)
LOC100621389Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
MAPK10Mitogen-activated protein kinase. (473 aa)
CDK6Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily. (326 aa)
MAPK11Mitogen-activated protein kinase. (364 aa)
HMGA1High mobility group AT-hook 1. (180 aa)
UBE2SUbiquitin conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (223 aa)
P14ARFANK_REP_REGION domain-containing protein. (159 aa)
A0A286ZRB3_PIGHistone domain-containing protein. (130 aa)
HIRAProtein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1009 aa)
MAP3K5Mitogen-activated protein kinase kinase kinase 5. (1425 aa)
CBX6Chromobox 6. (414 aa)
MAP2K3Mitogen-activated protein kinase kinase 3; Belongs to the protein kinase superfamily. (441 aa)
RPS6KA2Ribosomal protein S6 kinase. (759 aa)
ANAPC1Anaphase promoting complex subunit 1. (1944 aa)
CDC26Cell division cycle 26. (107 aa)
H1-4Histone cluster 1 H1 family member e. (207 aa)
ETS2Protein C-ets-2; Transcription factor; Belongs to the ETS family. (470 aa)
UBE2D1Ubiquitin-conjugating enzyme E2 D1 isoform 1; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
H2BC11Histone H2B; Belongs to the histone H2B family. (149 aa)
MAPKAPK3Mitogen-activated protein kinase-activated protein kinase 3; Belongs to the protein kinase superfamily. (384 aa)
ID1Inhibitor of DNA binding 1, dominant negative helix-loop-helix protein. (154 aa)
CDKN1CCyclin dependent kinase inhibitor 1C. (262 aa)
RNF2Ring finger protein 2. (368 aa)
RPS6KA1Ribosomal protein S6 kinase. (856 aa)
MAPK7Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (840 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (436 aa)
CDKN1Bp27Kip1. (198 aa)
H2AJHistone H2A; Belongs to the histone H2A family. (129 aa)
CEBPBCCAAT/enhancer-binding protein. (346 aa)
PHC3Polyhomeotic-like protein 3 isoform X1. (1011 aa)
EZH2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (762 aa)
ACDACD shelterin complex subunit and telomerase recruitment factor. (477 aa)
RPS27AUbiquitin-like domain-containing protein. (204 aa)
CDK2Cyclin dependent kinase 2; Belongs to the protein kinase superfamily. (381 aa)
LOC100152135Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC100152878Histone H2B; Belongs to the histone H2B family. (127 aa)
EHMT2Uncharacterized protein. (1233 aa)
RING1Ring finger protein 1. (406 aa)
CDKN1ACyclin dependent kinase inhibitor 1A. (163 aa)
TINF2TERF1 interacting nuclear factor 2. (455 aa)
TERF2IPTERF2 interacting protein. (401 aa)
TERF2Telomeric repeat-binding factor 2. (542 aa)
CCNE1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (410 aa)
CDKN2CCyclin-dependent kinase 4 inhibitor C. (168 aa)
SCMH1Scm polycomb group protein homolog 1. (647 aa)
ASF1AAnti-silencing function 1A histone chaperone. (204 aa)
CDKN2BCyclin dependent kinase inhibitor 2B. (131 aa)
CCNE2G1/S-specific cyclin-E2 isoform X1; Belongs to the cyclin family. (405 aa)
H2AC20Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC102159655Histone H2A; Belongs to the histone H2A family. (130 aa)
UBE2CUbiquitin conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
UBN1Ubinuclein 1. (1133 aa)
MAP4K4Mitogen-activated protein kinase kinase kinase kinase 4. (1378 aa)
F1RWC9_PIGHistone domain-containing protein. (142 aa)
H2AFZHistone H2A; Belongs to the histone H2A family. (128 aa)
CCNA1Cyclin-A1 isoform X1; Belongs to the cyclin family. (421 aa)
RB1RB transcriptional corepressor 1. (938 aa)
ANAPC5Anaphase-promoting complex subunit 5 isoform X1. (755 aa)
MAPKAPK5Protein kinase domain-containing protein. (543 aa)
LOC100155267Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
MAPK8Mitogen-activated protein kinase. (411 aa)
BMI1RING-type domain-containing protein. (336 aa)
MAP2K7Mitogen-activated protein kinase kinase 7. (465 aa)
KXD1Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] (305 aa)
RPS6KA3Ribosomal protein S6 kinase. (744 aa)
MAP2K4Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. (411 aa)
CDC16TPR_REGION domain-containing protein. (680 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (145 aa)
MAPK1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (568 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (469 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (752 aa)
ANAPC15Anaphase promoting complex subunit 15. (125 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (442 aa)
FZR1Fizzy and cell division cycle 20 related 1. (493 aa)
ANAPC2Anaphase promoting complex subunit 2; Belongs to the cullin family. (882 aa)
H2AC6Histone H2A; Belongs to the histone H2A family. (145 aa)
TNIKTRAF2 and NCK-interacting protein kinase isoform 1. (1389 aa)
HIST1H3EHistone H3; Belongs to the histone H3 family. (136 aa)
A0A287BCA6_PIGThioredoxin domain-containing protein. (99 aa)
LOC102160336UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (206 aa)
LOC100620620Histone H2A; Belongs to the histone H2A family. (113 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (708 aa)
H2BC21Histone H2B; Belongs to the histone H2B family. (126 aa)
EHMT1Euchromatic histone lysine methyltransferase 1. (1299 aa)
CDC27Cell division cycle 27. (825 aa)
CABIN1Calcineurin binding protein 1. (2222 aa)
KDM6BLysine demethylase 6B. (1638 aa)
CBX8Uncharacterized protein. (456 aa)
MAPK3Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (361 aa)
RAD50Zinc-hook domain-containing protein. (1358 aa)
H1-0H1 histone family member 0. (194 aa)
ANAPC16Anaphase promoting complex subunit 16. (85 aa)
H2AXHistone H2A; Belongs to the histone H2A family. (143 aa)
MAPK9Mitogen-activated protein kinase 9. (461 aa)
HMGA2Uncharacterized protein. (143 aa)
ETS1ETS proto-oncogene 1, transcription factor. (621 aa)
UBCUbiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] (837 aa)
MAPK14Mitogen-activated protein kinase. (360 aa)
ANAPC11RING-type domain-containing protein. (411 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (576 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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