STRINGSTRING
H1-0 H1-0 HMGA2 HMGA2 ASF1A ASF1A UBN1 UBN1 RB1 RB1 LMNB1 LMNB1 EP400 EP400 HMGA1 HMGA1 HIRA HIRA H1-4 H1-4 TP53 TP53 CABIN1 CABIN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H1-0H1 histone family member 0. (194 aa)
HMGA2Uncharacterized protein. (143 aa)
ASF1AAnti-silencing function 1A histone chaperone. (204 aa)
UBN1Ubinuclein 1. (1133 aa)
RB1RB transcriptional corepressor 1. (938 aa)
LMNB1Lamin-B1 isoform 1; Belongs to the intermediate filament family. (586 aa)
EP400E1A binding protein p400. (3210 aa)
HMGA1High mobility group AT-hook 1. (180 aa)
HIRAProtein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1009 aa)
H1-4Histone cluster 1 H1 family member e. (207 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (442 aa)
CABIN1Calcineurin binding protein 1. (2222 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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