15 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	XRN1	5'-3' exoribonuclease 1. (1703 aa)
	EXOSC6	Exosome component 6. (272 aa)
	EXOSC5	Exosome component 5. (299 aa)
	EXOSC3	Exosome complex component RRP40 isoform 1. (275 aa)
	EXOSC4	Exosome complex component RRP41. (245 aa)
	EXOSC7	Uncharacterized protein. (349 aa)
	DCP2	Decapping mRNA 2. (478 aa)
	MAPKAPK2	MAPK activated protein kinase 2; Belongs to the protein kinase superfamily. (361 aa)
	DCP1A	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family. (580 aa)
	EXOSC9	Exosome component 9. (455 aa)
	YWHAB	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta; Belongs to the 14-3-3 family. (264 aa)
	ZFP36L1	ZFP36 ring finger protein like 1. (348 aa)
	EXOSC8	Exosome component 8. (281 aa)
	DIS3	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (958 aa)
	EXOSC1	Exosome component 1. (255 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCP1A	DCP2	ENSSSCP00000023625	ENSSSCP00000015112	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Decapping mRNA 2.	0.998
DCP1A	DIS3	ENSSSCP00000023625	ENSSSCP00000060654	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.588
DCP1A	EXOSC1	ENSSSCP00000023625	ENSSSCP00000069176	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Exosome component 1.	0.514
DCP1A	EXOSC3	ENSSSCP00000023625	ENSSSCP00000005748	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Exosome complex component RRP40 isoform 1.	0.562
DCP1A	EXOSC4	ENSSSCP00000023625	ENSSSCP00000006334	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Exosome complex component RRP41.	0.613
DCP1A	EXOSC5	ENSSSCP00000023625	ENSSSCP00000003265	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Exosome component 5.	0.607
DCP1A	EXOSC6	ENSSSCP00000023625	ENSSSCP00000002934	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Exosome component 6.	0.596
DCP1A	EXOSC7	ENSSSCP00000023625	ENSSSCP00000012048	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Uncharacterized protein.	0.499
DCP1A	EXOSC8	ENSSSCP00000023625	ENSSSCP00000060162	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Exosome component 8.	0.499
DCP1A	EXOSC9	ENSSSCP00000023625	ENSSSCP00000034219	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Exosome component 9.	0.528
DCP1A	XRN1	ENSSSCP00000023625	ENSSSCP00000067024	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	5'-3' exoribonuclease 1.	0.986
DCP1A	ZFP36L1	ENSSSCP00000023625	ENSSSCP00000060036	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	ZFP36 ring finger protein like 1.	0.570
DCP2	DCP1A	ENSSSCP00000015112	ENSSSCP00000023625	Decapping mRNA 2.	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	0.998
DCP2	DIS3	ENSSSCP00000015112	ENSSSCP00000060654	Decapping mRNA 2.	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.650
DCP2	EXOSC1	ENSSSCP00000015112	ENSSSCP00000069176	Decapping mRNA 2.	Exosome component 1.	0.602
DCP2	EXOSC3	ENSSSCP00000015112	ENSSSCP00000005748	Decapping mRNA 2.	Exosome complex component RRP40 isoform 1.	0.582
DCP2	EXOSC4	ENSSSCP00000015112	ENSSSCP00000006334	Decapping mRNA 2.	Exosome complex component RRP41.	0.603
DCP2	EXOSC5	ENSSSCP00000015112	ENSSSCP00000003265	Decapping mRNA 2.	Exosome component 5.	0.637
DCP2	EXOSC6	ENSSSCP00000015112	ENSSSCP00000002934	Decapping mRNA 2.	Exosome component 6.	0.603
DCP2	EXOSC7	ENSSSCP00000015112	ENSSSCP00000012048	Decapping mRNA 2.	Uncharacterized protein.	0.735