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RPL13 RPL13 RPS18 RPS18 RPS11 RPS11 RPS8 RPS8 RPS12 RPS12 RPL10L RPL10L RPL36AL RPL36AL RPL30 RPL30 RPS3A RPS3A RPL34 RPL34 GSPT2 GSPT2 RPS28 RPS28 KXD1 KXD1 ETF1 ETF1 RPS25 RPS25 RPL26L1 RPL26L1 RPL19 RPL19 RPL18 RPL18 RPL26 RPL26 RPS17 RPS17 I3L8K3_PIG I3L8K3_PIG RPS21 RPS21 LOC100519675 LOC100519675 RPL27 RPL27 NCBP2 NCBP2 GSPT1 GSPT1 RPS27L RPS27L PABPC1 PABPC1 RPS16 RPS16 RPL39 RPL39 A0A286ZJ84_PIG A0A286ZJ84_PIG RPL23A RPL23A A0A286ZN03_PIG A0A286ZN03_PIG RPL10 RPL10 UPF1 UPF1 RPL24 RPL24 RPL23 RPL23 RPL31 RPL31 RPLP0 RPLP0 RPL7 RPL7 RPS7 RPS7 RPL22 RPL22 RPS24 RPS24 RPS15A RPS15A RPL38 RPL38 RPL22L1 RPL22L1 RPS5 RPS5 RPS15 RPS15 RPL29 RPL29 RPL18A RPL18A RPS2 RPS2 LOC100624650 LOC100624650 A0A287AZ41_PIG A0A287AZ41_PIG RPS27A RPS27A RPL28 RPL28 EIF4G1 EIF4G1 RPL6 RPL6 RPL32 RPL32 RPL21 RPL21 RPS27 RPS27 RPSA RPSA RPL37 RPL37 A0A5G2QAN6_PIG A0A5G2QAN6_PIG RPL12 RPL12 RPL36A-HNRNPH2 RPL36A-HNRNPH2 RPS3 RPS3 A0A5G2QBT0_PIG A0A5G2QBT0_PIG RPL35 RPL35 RPL37A RPL37A NCBP1 NCBP1 RPS4X RPS4X RPL3L RPL3L RPL8 RPL8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPL1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
RPS1840S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA; Belongs to the universal ribosomal protein uS13 family. (152 aa)
RPS11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
RPS1240S ribosomal protein S12. (132 aa)
RPL10LRibosomal protein L10 like. (214 aa)
RPL36AL60S ribosomal protein L36a. (299 aa)
RPL30Ribosomal_L7Ae domain-containing protein. (147 aa)
RPS3A40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
RPL3460S ribosomal protein L34; Component of the large ribosomal subunit. (117 aa)
GSPT2G1 to S phase transition 2. (750 aa)
RPS2840S ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family. (69 aa)
KXD1Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] (305 aa)
ETF1Eukaryotic peptide chain release factor subunit 1 isoform 1. (437 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
RPL26L160S ribosomal protein L26-like 1 isoform X1. (145 aa)
RPL19Ribosomal protein L19. (250 aa)
RPL1860S ribosomal protein L18; Component of the large ribosomal subunit. (219 aa)
RPL26Ribosomal protein L26. (145 aa)
RPS1740S ribosomal protein S17; Belongs to the eukaryotic ribosomal protein eS17 family. (135 aa)
I3L8K3_PIGUncharacterized protein. (170 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
LOC100519675Uncharacterized protein. (139 aa)
RPL2760S ribosomal protein L27; Component of the large ribosomal subunit. Required for proper rRNA processing and maturation of 28S and 5.8S rRNAs (By similarity). (136 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
GSPT1Eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform 1. (640 aa)
RPS27L40S ribosomal protein S27. (84 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (151 aa)
RPL39Uncharacterized protein. (51 aa)
A0A286ZJ84_PIGUncharacterized protein. (101 aa)
RPL23ARibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (156 aa)
A0A286ZN03_PIGRibosomal_L5 domain-containing protein. (174 aa)
RPL1060S ribosomal protein L10; Component of the large ribosomal subunit. Plays a role in the formation of actively translating ribosomes. May play a role in the embryonic brain development. (329 aa)
UPF1UPF1 RNA helicase and ATPase. (1127 aa)
RPL24Ribosomal protein L24. (217 aa)
RPL2360S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
RPL3160S ribosomal protein L31; Belongs to the eukaryotic ribosomal protein eL31 family. (129 aa)
RPLP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (322 aa)
RPL7Uncharacterized protein. (249 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
RPL2260S ribosomal protein L22. (69 aa)
RPS2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (149 aa)
RPS15ARibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
RPL38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (81 aa)
RPL22L1Uncharacterized protein. (120 aa)
RPS540S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (240 aa)
RPS1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
RPL2960S ribosomal protein L29; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL29 family. (255 aa)
RPL18A60S ribosomal protein L18a. (224 aa)
RPS2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (293 aa)
LOC100624650Uncharacterized protein. (192 aa)
A0A287AZ41_PIGUncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (146 aa)
RPS27AUbiquitin-like domain-containing protein. (204 aa)
RPL28Ribosomal protein L28. (137 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1. (1613 aa)
RPL660S ribosomal protein L6; Component of the large ribosomal subunit. (271 aa)
RPL3260S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family. (135 aa)
RPL2160S ribosomal protein L21; Component of the large ribosomal subunit. (160 aa)
RPS2740S ribosomal protein S27. (84 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (100 aa)
A0A5G2QAN6_PIGS10_plectin domain-containing protein. (165 aa)
RPL12Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (217 aa)
RPL36A-HNRNPH2RPL36A-HNRNPH2 readthrough; Belongs to the eukaryotic ribosomal protein eL42 family. (154 aa)
RPS340S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] (259 aa)
A0A5G2QBT0_PIGRibosomal_L7Ae domain-containing protein. (300 aa)
RPL3560S ribosomal protein L35; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL29 family. (123 aa)
RPL37AUncharacterized protein. (107 aa)
NCBP1Nuclear cap binding protein subunit 1. (1117 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
RPL3LRibosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (441 aa)
RPL8Ribosomal_L2_C domain-containing protein. (319 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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