STRINGSTRING
GABARAPL1 GABARAPL1 ZFYVE1 ZFYVE1 RRAS RRAS MTOR MTOR RRAGC RRAGC PIK3C3 PIK3C3 IGF1R IGF1R ATG14 ATG14 RRAGA RRAGA MLST8 MLST8 LAMP1 LAMP1 CAMKK2 CAMKK2 SNAP29 SNAP29 MAPK8 MAPK8 PTEN PTEN BECN2 BECN2 CTSL CTSL PRKCQ PRKCQ CTSV CTSV MTMR14 MTMR14 RUBCN RUBCN ATG3 ATG3 ATG13 ATG13 STK11 STK11 RAB8A RAB8A PPP2CA PPP2CA ATG16L2 ATG16L2 MTMR4 MTMR4 RAB39B RAB39B GABARAP GABARAP RPTOR RPTOR ATG2A ATG2A RAF1 RAF1 ATG10 ATG10 BNIP3 BNIP3 RB1CC1 RB1CC1 VAMP8 VAMP8 ATG9B ATG9B PRKAA1 PRKAA1 CTSB CTSB RRAGB RRAGB RAB33B RAB33B DAPK1 DAPK1 ATG4A ATG4A K7GKB8_PIG K7GKB8_PIG IRS4 IRS4 EIF2AK3 EIF2AK3 MAPK10 MAPK10 MAP2K2 MAP2K2 IGBP1 IGBP1 RRAGD RRAGD UVRAG UVRAG BCL2L1 BCL2L1 STX17 STX17 DAPK2 DAPK2 TRAF6 TRAF6 RPS6KB2 RPS6KB2 PRKACA PRKACA ATG9A ATG9A PDPK1 PDPK1 CTSD CTSD CFLAR CFLAR EIF2S1 EIF2S1 RRAS2 RRAS2 ATG16L1 ATG16L1 DDIT4 DDIT4 SUPT20H SUPT20H BAD BAD ATG101 ATG101 RAB7B RAB7B ATG7 ATG7 INS INS NRAS NRAS AKT2 AKT2 TBK1 TBK1 EIF2AK4 EIF2AK4 NRBF2 NRBF2 HIF1A HIF1A AKT1 AKT1 C9orf72 C9orf72 HRAS HRAS IRS2 IRS2 LAMP2 LAMP2 PIK3CB PIK3CB PIK3CA PIK3CA LOC100511937 LOC100511937 SMCR8 SMCR8 PRKCD PRKCD ATG12 ATG12 HMGB1 HMGB1 TSC2 TSC2 ATG2B ATG2B WIPI2 WIPI2 PRKAA2 PRKAA2 PIK3R4 PIK3R4 MAP2K1 MAP2K1 ATG4C ATG4C MAP3K7 MAP3K7 MAPK3 MAPK3 MTMR3 MTMR3 PRKACB PRKACB RAB1A RAB1A ATG4B ATG4B IRS1 IRS1 ITPR1 ITPR1 GABARAPL2 GABARAPL2 PRAP1 PRAP1 DEPTOR DEPTOR RPS6KB1 RPS6KB1 AKT1S1 AKT1S1 WIPI1 WIPI1 WDR41 WDR41 AKT3 AKT3 ATG5 ATG5 DAPK3 DAPK3 TSC1 TSC1 PPP2CB PPP2CB MAPK1 MAPK1 RHEB RHEB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GABARAPL1Uncharacterized protein. (148 aa)
ZFYVE1Zinc finger FYVE-type containing 1. (790 aa)
RRASRAS related. (218 aa)
MTORSerine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2548 aa)
RRAGCRas related GTP binding C. (440 aa)
PIK3C3Phosphatidylinositol 3-kinase catalytic subunit type 3; Catalytic subunit of the PI3K complex that mediates formation of phosphatidylinositol 3-phosphate; different complex forms are believed to play a role in multiple membrane trafficking pathways: PI3KC3-C1 is involved in initiation of autophagosomes and PI3KC3-C2 in maturation of autophagosomes and endocytosis. Involved in regulation of degradative endocytic trafficking and required for the abcission step in cytokinesis, probably in the context of PI3KC3-C2. Involved in the transport of lysosomal enzyme precursors to lysosomes. Requ [...] (863 aa)
IGF1RTyrosine-protein kinase receptor. (1367 aa)
ATG14Autophagy related 14. (510 aa)
RRAGARas related GTP binding A. (313 aa)
MLST8MTOR associated protein, LST8 homolog. (455 aa)
LAMP1Uncharacterized protein. (413 aa)
CAMKK2Calcium/calmodulin-dependent protein kinase kinase 2 isoform 1. (578 aa)
SNAP29Synaptosome associated protein 29. (258 aa)
MAPK8Mitogen-activated protein kinase. (411 aa)
PTENUncharacterized protein. (576 aa)
BECN2Beclin 2. (444 aa)
CTSLCathepsin L1 isoform 1 preproprotein; Belongs to the peptidase C1 family. (332 aa)
PRKCQProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (732 aa)
CTSVCathepsin L1 heavy chain; Thiol protease important for the overall degradation of proteins in lysosomes (By similarity). Involved in the solubilization of cross-linked TG/thyroglobulin and in the subsequent release of thyroid hormone thyroxine (T4) by limited proteolysis of TG/thyroglobulin in the thyroid follicle lumen (By similarity). Belongs to the peptidase C1 family. (334 aa)
MTMR14Myotubularin related protein 14. (728 aa)
RUBCNKIAA0226 protein transcript variant 2. (971 aa)
ATG3Autophagy-related protein 3. (320 aa)
ATG13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (550 aa)
STK11Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (438 aa)
RAB8AUncharacterized protein. (242 aa)
PPP2CASerine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A is the major phosphatase for microtubule-associated proteins (MAPs). PP2A can modulate the activity of phosphorylase B kinase casein kinase 2, mitogen-stimulated S6 kinase, and MAP-2 kinase. Cooperates with SGO2 to protect centromeric cohesin from separase- mediated cleavage in oocytes specifically during meiosis I. Activates RAF1 by dephosphorylating it at 'Ser-259' (By similarity). (309 aa)
ATG16L2Autophagy related 16 like 2. (647 aa)
MTMR4Myotubularin related protein 4. (1205 aa)
RAB39BRAB39B, member RAS oncogene family. (213 aa)
GABARAPUncharacterized protein. (98 aa)
RPTORRegulatory associated protein of MTOR complex 1. (1351 aa)
ATG2AAutophagy related 2A. (1929 aa)
RAF1RAF proto-oncogene serine/threonine-protein kinase isoform a. (668 aa)
ATG10Autophagy related 10. (330 aa)
BNIP3BCL2 interacting protein 3. (202 aa)
RB1CC1RB1 inducible coiled-coil 1. (1608 aa)
VAMP8V-SNARE coiled-coil homology domain-containing protein. (143 aa)
ATG9BAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (923 aa)
PRKAA1Non-specific serine/threonine protein kinase. (559 aa)
CTSBCathepsin B heavy chain; Thiol protease which is believed to participate in intracellular degradation and turnover of proteins (By similarity). Cleaves matrix extracellular phosphoglycoprotein MEPE (By similarity). Involved in the solubilization of cross-linked TG/thyroglobulin in the thyroid follicle lumen (By similarity). Has also been implicated in tumor invasion and metastasis (By similarity). (416 aa)
RRAGBRas-related GTP-binding protein B long isoform. (374 aa)
RAB33BRAB33B, member RAS oncogene family. (229 aa)
DAPK1Death associated protein kinase 1. (1442 aa)
ATG4ACysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (489 aa)
K7GKB8_PIGUncharacterized protein. (517 aa)
IRS4Insulin receptor substrate 4. (1175 aa)
EIF2AK3Eukaryotic translation initiation factor 2 alpha kinase 3. (1095 aa)
MAPK10Mitogen-activated protein kinase. (473 aa)
MAP2K2Dual specificity mitogen-activated protein kinase kinase 2; Belongs to the protein kinase superfamily. (400 aa)
IGBP1Uncharacterized protein. (339 aa)
RRAGDRas-related GTP-binding protein D. (396 aa)
UVRAGUV radiation resistance associated. (748 aa)
BCL2L1Bcl-2-like protein 1; Potent inhibitor of cell death. Inhibits activation of caspases. Appears to regulate cell death by blocking the voltage- dependent anion channel (VDAC) by binding to it and preventing the release of the caspase activator, CYC1, from the mitochondrial membrane. Also acts as a regulator of G2 checkpoint and progression to cytokinesis during mitosis. Regulates presynaptic plasticity, including neurotransmitter release and recovery, number of axonal mitochondria as well as size and number of synaptic vesicle clusters. During synaptic stimulation, increases ATP availab [...] (233 aa)
STX17Syntaxin-17 isoform X1; Belongs to the syntaxin family. (302 aa)
DAPK2Death associated protein kinase 2; Belongs to the protein kinase superfamily. (483 aa)
TRAF6TNF receptor-associated factor 6; E3 ubiquitin ligase that, together with UBE2N and UBE2V1, mediates the synthesis of 'Lys-63'-linked-polyubiquitin chains conjugated to proteins, such as IKBKG, IRAK1, AKT1 and AKT2. Also mediates ubiquitination of free/unanchored polyubiquitin chain that leads to MAP3K7 activation. Mediates activation of NF-kappa-B and JUN. May be essential for the formation of functional osteoclasts. Seems to also play a role in dendritic cells (DCs) maturation and/or activation. Represses c-Myb-mediated transactivation, in B-lymphocytes. Adapter protein that seems to [...] (541 aa)
RPS6KB2Non-specific serine/threonine protein kinase. (526 aa)
PRKACAcAMP-dependent protein kinase catalytic subunit alpha; Phosphorylates a large number of substrates in the cytoplasm and the nucleus. Regulates the abundance of compartmentalized pools of its regulatory subunits through phosphorylation of PJA2 which binds and ubiquitinates these subunits, leading to their subsequent proteolysis. Phosphorylates CDC25B, ABL1, NFKB1, CLDN3, PSMC5/RPT6, PJA2, RYR2, RORA and VASP. RORA is activated by phosphorylation. Required for glucose- mediated adipogenic differentiation increase and osteogenic differentiation inhibition from osteoblasts. Involved in the [...] (357 aa)
ATG9AAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (871 aa)
PDPK13-phosphoinositide dependent protein kinase 1. (668 aa)
CTSDCathepsin D heavy chain; Acid protease active in intracellular protein breakdown. Plays a role in APP processing following cleavage and activation by ADAM30 which leads to APP degradation; Belongs to the peptidase A1 family. (408 aa)
CFLARCASP8 and FADD-like apoptosis regulator isoform 1; Belongs to the peptidase C14A family. (509 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reaction catalyzed [...] (315 aa)
RRAS2Uncharacterized protein. (276 aa)
ATG16L1Autophagy-related protein 16-1 isoform X1. (623 aa)
DDIT4Uncharacterized protein. (231 aa)
SUPT20HSPT20 homolog, SAGA complex component. (858 aa)
BADBCL2 associated agonist of cell death. (209 aa)
ATG101Autophagy-related protein 101 isoform X1. (218 aa)
RAB7BRAB7B, member RAS oncogene family. (200 aa)
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (710 aa)
INSInsulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. (108 aa)
NRASGTPase NRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity; Belongs to the small GTPase superfamily. Ras family. (189 aa)
AKT2Non-specific serine/threonine protein kinase. (525 aa)
TBK1TANK binding kinase TBK1. (729 aa)
EIF2AK4Eukaryotic translation initiation factor 2 alpha kinase 4. (1633 aa)
NRBF2Nuclear receptor binding factor 2. (288 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform 1. (824 aa)
AKT1Non-specific serine/threonine protein kinase. (785 aa)
C9orf72C9orf72-SMCR8 complex subunit. (489 aa)
HRASHRas proto-oncogene, GTPase. (189 aa)
IRS2Insulin receptor substrate 2. (1092 aa)
LAMP2Lysosome-associated membrane glycoprotein 2 isoform A. (411 aa)
PIK3CBPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1; Belongs to the PI3/PI4-kinase family. (1070 aa)
PIK3CAPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
LOC100511937Uncharacterized protein. (532 aa)
SMCR8SMCR8-C9orf72 complex subunit. (935 aa)
PRKCDProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (723 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
HMGB1High mobility group protein B1; Multifunctional redox sensitive protein with various roles in different cellular compartments. In the nucleus is one of the major chromatin-associated non-histone proteins and acts as a DNA chaperone involved in replication, transcription, chromatin remodeling, V(D)J recombination, DNA repair and genome stability. Proposed to be an universal biosensor for nucleic acids. Promotes host inflammatory response to sterile and infectious signals and is involved in the coordination and integration of innate and adaptive immune responses. In the cytoplasm functio [...] (241 aa)
TSC2TSC complex subunit 2. (1836 aa)
ATG2BAutophagy related 2B. (2077 aa)
WIPI2WD repeat domain, phosphoinositide interacting 2. (559 aa)
PRKAA25'-AMP-activated protein kinase catalytic subunit alpha-2; Catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. Also acts a [...] (552 aa)
PIK3R4Phosphoinositide-3-kinase regulatory subunit 4. (1302 aa)
MAP2K1Dual specificity mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (393 aa)
ATG4CCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (458 aa)
MAP3K7Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily. (606 aa)
MAPK3Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (361 aa)
MTMR3Myotubularin related protein 3. (1215 aa)
PRKACBcAMP-dependent protein kinase catalytic subunit beta; Mediates cAMP-dependent signaling triggered by receptor binding to GPCRs. PKA activation regulates diverse cellular processes such as cell proliferation, the cell cycle, differentiation and regulation of microtubule dynamics, chromatin condensation and decondensation, nuclear envelope disassembly and reassembly, as well as regulation of intracellular transport mechanisms and ion flux. Regulates the abundance of compartmentalized pools of its regulatory subunits through phosphorylation of PJA2 which binds and ubiquitinates these subu [...] (394 aa)
RAB1ARas-related protein Rab-1A; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. RAB1A regulates vesicular protein transport from the endoplasmic reticulum (ER) to the Golgi compartment and on to the cell surface, and plays a role in IL-8 and growth hormone secreti [...] (217 aa)
ATG4BCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (402 aa)
IRS1Insulin receptor substrate 1. (1241 aa)
ITPR1Inositol 1,4,5-trisphosphate receptor type 1. (2759 aa)
GABARAPL2Uncharacterized protein. (187 aa)
PRAP1Uncharacterized protein. (151 aa)
DEPTORDEP domain-containing mTOR-interacting protein isoform 1. (409 aa)
RPS6KB1Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (525 aa)
AKT1S1AKT1 substrate 1. (323 aa)
WIPI1Uncharacterized protein. (477 aa)
WDR41WD repeat-containing protein 41 isoform X1. (459 aa)
AKT3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (500 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. Conjugation with ATG12, through a ubiquitin-like conjugating system involving ATG7 as an E1-like activating enzyme and ATG10 as an E2-like conjugating enzyme, is essential for its function. The ATG12-ATG5 conjugate acts as an E3- like enzyme which is required for lipidation of ATG8 family proteins and their association to the vesicle membranes. Involved in mitochondrial quality control after oxidative damage, and in subsequent cellular longevity. Plays a critical role in multiple aspects of lymphocyte development and is ess [...] (287 aa)
DAPK3Death associated protein kinase 3; Belongs to the protein kinase superfamily. (454 aa)
TSC1TSC complex subunit 1. (1166 aa)
PPP2CBSerine/threonine-protein phosphatase. (476 aa)
MAPK1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (568 aa)
RHEBUncharacterized protein. (220 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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