(56 nodes) Mixed, incl. Dopamine Neurotransmitter Release Cycle, and Neurotransmitter loading into synaptic vesicle network (Camelus dromedarius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HERC6	Putative E3 ubiquitin-protein ligase HERC6. (1016 aa)
	RIMS1	Regulating synaptic membrane exocytosis protein 1. (1012 aa)
	SCRN1	Secernin-1. (414 aa)
	APBA1	Amyloid-beta A4 protein-binding family A member 1. (822 aa)
	LIN7B	Protein lin-7-like protein B. (206 aa)
	PPFIA3	Liprin-alpha-3. (1194 aa)
	CPLX2	Complexin-2. (134 aa)
	RAB3C	Ras-related protein Rab-3C. (227 aa)
	BSN	Protein bassoon. (3723 aa)
	RAB3B	Ras-related protein Rab-3B. (219 aa)
	RTKN	Rhotekin. (564 aa)
	CPLX1	Complexin-1. (134 aa)
	LIN7C	Protein lin-7-like protein C. (222 aa)
	SLC17A7	Vesicular glutamate transporter 1. (560 aa)
	SLC18A1	Chromaffin granule amine transporter. (512 aa)
	Cadr_000015837	Protein unc-13-like protein B. (4266 aa)
	SLC32A1	Vesicular inhibitory amino acid transporter. (526 aa)
	SYT7	Synaptotagmin-7. (611 aa)
	SLC17A6	Vesicular glutamate transporter 2. (582 aa)
	LIN7A	Protein lin-7-like protein A. (233 aa)
	PCYOX1	Prenylcysteine oxidase. (493 aa)
	SNCA	Alpha-synuclein. (140 aa)
	PPFIBP1	Liprin-beta-1. (1032 aa)
	RAB3A	Ras-related protein Rab-3A. (302 aa)
	SYT13	Synaptotagmin-13. (426 aa)
	GAP43	Neuromodulin. (267 aa)
	OTOF	Otoferlin. (1997 aa)
	PPFIBP2	Liprin-beta-2. (921 aa)
	MPP2	MAGUK p55 subfamily member 2. (640 aa)
	SYNGR3	Synaptogyrin-3. (229 aa)
	RIMS4	Regulating synaptic membrane exocytosis protein 4. (269 aa)
	UNC13A	Protein unc-13-like protein A. (1723 aa)
	MAP2	Microtubule-associated protein 2. (2023 aa)
	RIMS3	Regulating synaptic membrane exocytosis protein 3. (308 aa)
	SYT1	Synaptotagmin-1. (422 aa)
	SYN3	Synapsin-3. (580 aa)
	SYN1	Synapsin-2. (706 aa)
	UNC13C	Protein unc-13-like protein C. (2217 aa)
	SLC18A3	Vesicular acetylcholine transporter. (528 aa)
	S100A13	Protein S100-A13. (98 aa)
	SLC18A2	Synaptic vesicular amine transporter. (518 aa)
	SYN2	Synapsin II. (412 aa)
	SLC17A8	Vesicular glutamate transporter 3. (589 aa)
	CALB1	Calbindin. (261 aa)
	SYP	Synaptophysin. (312 aa)
	CPLX4	Complexin-3/4. (160 aa)
	RPH3A	Rabphilin-3A. (702 aa)
	PCLO	Protein piccolo. (2627 aa)
	ENSCDRP00005028826	annotation not available (639 aa)
	SYT2	Synaptotagmin-2. (423 aa)
	CASK	Peripheral plasma membrane protein CASK. (927 aa)
	RIMS2	Regulating synaptic membrane exocytosis protein 2. (1587 aa)
	TH	Tyrosine 3-monooxygenase. (494 aa)
	PPFIA1	Liprin-alpha-1. (1228 aa)
	PTPRS	Receptor-type tyrosine-protein phosphatase S. (749 aa)
	PPFIA4	Liprin-alpha-4. (1184 aa)

Your Current Organism:

Camelus dromedarius

NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBA1	CASK	ENSCDRP00005003147	ENSCDRP00005029958	Amyloid-beta A4 protein-binding family A member 1.	Peripheral plasma membrane protein CASK.	0.985
APBA1	LIN7A	ENSCDRP00005003147	ENSCDRP00005012926	Amyloid-beta A4 protein-binding family A member 1.	Protein lin-7-like protein A.	0.742
APBA1	LIN7B	ENSCDRP00005003147	ENSCDRP00005004449	Amyloid-beta A4 protein-binding family A member 1.	Protein lin-7-like protein B.	0.669
APBA1	LIN7C	ENSCDRP00005003147	ENSCDRP00005009665	Amyloid-beta A4 protein-binding family A member 1.	Protein lin-7-like protein C.	0.669
APBA1	MPP2	ENSCDRP00005003147	ENSCDRP00005019198	Amyloid-beta A4 protein-binding family A member 1.	MAGUK p55 subfamily member 2.	0.662
APBA1	PPFIA1	ENSCDRP00005003147	ENSCDRP00005031345	Amyloid-beta A4 protein-binding family A member 1.	Liprin-alpha-1.	0.430
APBA1	PPFIA3	ENSCDRP00005003147	ENSCDRP00005004508	Amyloid-beta A4 protein-binding family A member 1.	Liprin-alpha-3.	0.491
APBA1	PPFIA4	ENSCDRP00005003147	ENSCDRP00005032435	Amyloid-beta A4 protein-binding family A member 1.	Liprin-alpha-4.	0.430
APBA1	RIMS1	ENSCDRP00005003147	ENSCDRP00005001936	Amyloid-beta A4 protein-binding family A member 1.	Regulating synaptic membrane exocytosis protein 1.	0.428
APBA1	RIMS2	ENSCDRP00005003147	ENSCDRP00005030652	Amyloid-beta A4 protein-binding family A member 1.	Regulating synaptic membrane exocytosis protein 2.	0.717
APBA1	RIMS3	ENSCDRP00005003147	ENSCDRP00005020807	Amyloid-beta A4 protein-binding family A member 1.	Regulating synaptic membrane exocytosis protein 3.	0.411
APBA1	SYT1	ENSCDRP00005003147	ENSCDRP00005021095	Amyloid-beta A4 protein-binding family A member 1.	Synaptotagmin-1.	0.419
APBA1	SYT2	ENSCDRP00005003147	ENSCDRP00005028829	Amyloid-beta A4 protein-binding family A member 1.	Synaptotagmin-2.	0.433
BSN	ENSCDRP00005028826	ENSCDRP00005008050	ENSCDRP00005028826	Protein bassoon.	annotation not available	0.469
BSN	OTOF	ENSCDRP00005008050	ENSCDRP00005018260	Protein bassoon.	Otoferlin.	0.511
BSN	PCLO	ENSCDRP00005008050	ENSCDRP00005028781	Protein bassoon.	Protein piccolo.	0.555
BSN	RIMS1	ENSCDRP00005008050	ENSCDRP00005001936	Protein bassoon.	Regulating synaptic membrane exocytosis protein 1.	0.434
CALB1	CASK	ENSCDRP00005026726	ENSCDRP00005029958	Calbindin.	Peripheral plasma membrane protein CASK.	0.690
CALB1	MAP2	ENSCDRP00005026726	ENSCDRP00005020407	Calbindin.	Microtubule-associated protein 2.	0.473
CALB1	SLC17A6	ENSCDRP00005026726	ENSCDRP00005011617	Calbindin.	Vesicular glutamate transporter 2.	0.583