(16 nodes) Cytosolic small ribosomal subunit network (Camelus dromedarius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS14	40S ribosomal protein S14. (235 aa)
	RPS9	40S ribosomal protein S9. (194 aa)
	RPS3	Small subunit ribosomal protein S3e. (289 aa)
	RPS16	40S ribosomal protein S16. (146 aa)
	RPS11	40S ribosomal protein S11. (158 aa)
	RPS5	40S ribosomal protein S5. (204 aa)
	FAU	Ubiquitin-like protein FUBI. (133 aa)
	RPS28	Small subunit ribosomal protein S28e. (69 aa)
	RPS15	40S ribosomal protein S15. (459 aa)
	Cadr_000004400	40S ribosomal protein SA. (175 aa)
	RPS23	40S ribosomal protein S23. (151 aa)
	RPS29	40S ribosomal protein S29. (56 aa)
	RPS20	40S ribosomal protein S20. (119 aa)
	Cadr_000022560	40S ribosomal protein S2. (231 aa)
	RPS18	40S ribosomal protein S18. (152 aa)
	RPS24	40S ribosomal protein S24. (132 aa)

Your Current Organism:

Camelus dromedarius

NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cadr_000004400	Cadr_000022560	ENSCDRP00005020097	ENSCDRP00005030767	40S ribosomal protein SA.	40S ribosomal protein S2.	0.999
Cadr_000004400	FAU	ENSCDRP00005020097	ENSCDRP00005015342	40S ribosomal protein SA.	Ubiquitin-like protein FUBI.	0.998
Cadr_000004400	RPS11	ENSCDRP00005020097	ENSCDRP00005010653	40S ribosomal protein SA.	40S ribosomal protein S11.	0.999
Cadr_000004400	RPS14	ENSCDRP00005020097	ENSCDRP00005002873	40S ribosomal protein SA.	40S ribosomal protein S14.	0.999
Cadr_000004400	RPS15	ENSCDRP00005020097	ENSCDRP00005016547	40S ribosomal protein SA.	40S ribosomal protein S15.	0.999
Cadr_000004400	RPS16	ENSCDRP00005020097	ENSCDRP00005010556	40S ribosomal protein SA.	40S ribosomal protein S16.	0.999
Cadr_000004400	RPS18	ENSCDRP00005020097	ENSCDRP00005031765	40S ribosomal protein SA.	40S ribosomal protein S18.	0.999
Cadr_000004400	RPS20	ENSCDRP00005020097	ENSCDRP00005029536	40S ribosomal protein SA.	40S ribosomal protein S20.	0.999
Cadr_000004400	RPS23	ENSCDRP00005020097	ENSCDRP00005024464	40S ribosomal protein SA.	40S ribosomal protein S23.	0.999
Cadr_000004400	RPS24	ENSCDRP00005020097	ENSCDRP00005032710	40S ribosomal protein SA.	40S ribosomal protein S24.	0.999
Cadr_000004400	RPS28	ENSCDRP00005020097	ENSCDRP00005016204	40S ribosomal protein SA.	Small subunit ribosomal protein S28e.	0.999
Cadr_000004400	RPS29	ENSCDRP00005020097	ENSCDRP00005029450	40S ribosomal protein SA.	40S ribosomal protein S29.	0.999
Cadr_000004400	RPS3	ENSCDRP00005020097	ENSCDRP00005004685	40S ribosomal protein SA.	Small subunit ribosomal protein S3e.	0.999
Cadr_000004400	RPS5	ENSCDRP00005020097	ENSCDRP00005014176	40S ribosomal protein SA.	40S ribosomal protein S5.	0.999
Cadr_000004400	RPS9	ENSCDRP00005020097	ENSCDRP00005004192	40S ribosomal protein SA.	40S ribosomal protein S9.	0.999
Cadr_000022560	Cadr_000004400	ENSCDRP00005030767	ENSCDRP00005020097	40S ribosomal protein S2.	40S ribosomal protein SA.	0.999
Cadr_000022560	FAU	ENSCDRP00005030767	ENSCDRP00005015342	40S ribosomal protein S2.	Ubiquitin-like protein FUBI.	0.995
Cadr_000022560	RPS11	ENSCDRP00005030767	ENSCDRP00005010653	40S ribosomal protein S2.	40S ribosomal protein S11.	0.998
Cadr_000022560	RPS14	ENSCDRP00005030767	ENSCDRP00005002873	40S ribosomal protein S2.	40S ribosomal protein S14.	0.997
Cadr_000022560	RPS15	ENSCDRP00005030767	ENSCDRP00005016547	40S ribosomal protein S2.	40S ribosomal protein S15.	0.998