STRINGSTRING
PRPF31 PRPF31 Cadr_000006614 Cadr_000006614 LSM5 LSM5 LSM8 LSM8 LSM3 LSM3 EFTUD2 EFTUD2 PRPF4 PRPF4 DDX23 DDX23 LSM2 LSM2 LSM7 LSM7 PRPF8 PRPF8 LSM4 LSM4 PRPF6 PRPF6 C19orf54 C19orf54 LSM1 LSM1 PPIH PPIH SNRNP40 SNRNP40 PRPF3 PRPF3 SART1 SART1 SNRNP200 SNRNP200 LSM6 LSM6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (550 aa)
Cadr_000006614Thioredoxin-like protein 4A. (146 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5. (99 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8. (96 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3. (102 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (1051 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
DDX23Putative ATP-dependent RNA helicase DDX23. (820 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2. (187 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (103 aa)
PRPF8Pre-mRNA-processing-splicing factor 8. (2335 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4. (139 aa)
PRPF6Pre-mRNA-processing factor 6. (985 aa)
C19orf54UPF0692 protein C19orf54-like protein. (346 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1. (133 aa)
PPIHPeptidyl-prolyl cis-trans isomerase H. (177 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3. (683 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (804 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2135 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (96 aa)
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.