32 items (Camelus dromedarius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CTNNA2	Catenin alpha 2. (584 aa)
	CDH2	Cadherin-2. (906 aa)
	DCHS1	Protocadherin-16. (3205 aa)
	CDH7	Cadherin-7. (785 aa)
	CDH19	Cadherin-19. (770 aa)
	CDHR2	Cadherin-related family member 2. (1316 aa)
	APC2	Adenomatous polyposis coli protein 2. (2195 aa)
	CDH22	Cadherin-22. (779 aa)
	CDH24	Cadherin-24. (861 aa)
	CDH16	Cadherin-16. (829 aa)
	CDH11	Cadherin-11. (796 aa)
	APC	Adenomatous polyposis coli protein. (2873 aa)
	CDH8	Cadherin-8. (799 aa)
	CDH5	Cadherin-5. (781 aa)
	CDH4	Cadherin-4. (852 aa)
	CDH26	Cadherin-like protein 26. (695 aa)
	JUP	Junction plakoglobin. (838 aa)
	CDH18	Cadherin-18. (790 aa)
	CDH12	Cadherin-12. (794 aa)
	CDH10	Cadherin-10. (788 aa)
	CDH9	Cadherin-9. (789 aa)
	CDH6	Cadherin-6. (790 aa)
	CTNND1	Catenin delta-1. (967 aa)
	CDH13	Cadherin-13. (713 aa)
	CTNNA1	Catenin alpha-1. (923 aa)
	CDH17	Cadherin-17. (832 aa)
	CDH15	Cadherin-15. (953 aa)
	CTNNB1	Catenin beta-1. (783 aa)
	CDH20	Cadherin-20. (801 aa)
	CDH1	Cadherin-1. (884 aa)
	CDH3	Cadherin-3. (829 aa)
	ENSCDRP00005025431	annotation not available (43 aa)

Your Current Organism:

Camelus dromedarius

NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC	CTNNB1	ENSCDRP00005009388	ENSCDRP00005029436	Adenomatous polyposis coli protein.	Catenin beta-1.	0.999
APC	JUP	ENSCDRP00005009388	ENSCDRP00005004794	Adenomatous polyposis coli protein.	Junction plakoglobin.	0.827
APC2	CTNNB1	ENSCDRP00005016239	ENSCDRP00005029436	Adenomatous polyposis coli protein 2.	Catenin beta-1.	0.905
APC2	JUP	ENSCDRP00005016239	ENSCDRP00005004794	Adenomatous polyposis coli protein 2.	Junction plakoglobin.	0.827
CDH1	CDH11	ENSCDRP00005026258	ENSCDRP00005009397	Cadherin-1.	Cadherin-11.	0.577
CDH1	CDH15	ENSCDRP00005026258	ENSCDRP00005029681	Cadherin-1.	Cadherin-15.	0.418
CDH1	CDH2	ENSCDRP00005026258	ENSCDRP00005024741	Cadherin-1.	Cadherin-2.	0.883
CDH1	CDH4	ENSCDRP00005026258	ENSCDRP00005006652	Cadherin-1.	Cadherin-4.	0.654
CDH1	CDH5	ENSCDRP00005026258	ENSCDRP00005007782	Cadherin-1.	Cadherin-5.	0.654
CDH1	CTNNA1	ENSCDRP00005026258	ENSCDRP00005001145	Cadherin-1.	Catenin alpha-1.	0.980
CDH1	CTNNA2	ENSCDRP00005026258	ENSCDRP00005025078	Cadherin-1.	Catenin alpha 2.	0.725
CDH1	CTNNB1	ENSCDRP00005026258	ENSCDRP00005029436	Cadherin-1.	Catenin beta-1.	0.998
CDH1	CTNND1	ENSCDRP00005026258	ENSCDRP00005001958	Cadherin-1.	Catenin delta-1.	0.985
CDH1	ENSCDRP00005025431	ENSCDRP00005026258	ENSCDRP00005025431	Cadherin-1.	annotation not available	0.725
CDH1	JUP	ENSCDRP00005026258	ENSCDRP00005004794	Cadherin-1.	Junction plakoglobin.	0.984
CDH10	CDH3	ENSCDRP00005003449	ENSCDRP00005026120	Cadherin-10.	Cadherin-3.	0.456
CDH10	CTNNA1	ENSCDRP00005003449	ENSCDRP00005001145	Cadherin-10.	Catenin alpha-1.	0.474
CDH10	CTNNA2	ENSCDRP00005003449	ENSCDRP00005025078	Cadherin-10.	Catenin alpha 2.	0.474
CDH10	CTNNB1	ENSCDRP00005003449	ENSCDRP00005029436	Cadherin-10.	Catenin beta-1.	0.510
CDH10	CTNND1	ENSCDRP00005003449	ENSCDRP00005001958	Cadherin-10.	Catenin delta-1.	0.548