68 items (Camelus dromedarius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BRIX1	Ribosome biogenesis protein BRX1-like protein. (353 aa)
	RPS14	40S ribosomal protein S14. (235 aa)
	RPL5	60S ribosomal protein L5. (297 aa)
	TST	Thiosulfate sulfurtransferase. (336 aa)
	RPS11	40S ribosomal protein S11. (158 aa)
	ENSCDRP00005010692	annotation not available (113 aa)
	RPL9	60S ribosomal protein L9. (221 aa)
	NOL12	Nucleolar protein 12. (214 aa)
	RPS4X	40S ribosomal protein S4. (263 aa)
	NGRN	Neugrin. (295 aa)
	Cadr_000000092	60S ribosomal protein L9. (111 aa)
	RPS5	40S ribosomal protein S5. (204 aa)
	Cadr_000002160	GTPase Era. (249 aa)
	RPF1	Ribosome production factor 1. (349 aa)
	ERAL1	GTPase Era. (437 aa)
	CCDC105	Coiled-coil domain-containing protein 105. (496 aa)
	ENSCDRP00005019321	annotation not available (77 aa)
	RPL12	60S ribosomal protein L12. (165 aa)
	MRPL18	39S ribosomal protein L18. (246 aa)
	PTCD3	Pentatricopeptide repeat domain-containing protein 3. (704 aa)
	MRPS18A	28S ribosomal protein S18a. (196 aa)
	RPS13	40S ribosomal protein S13. (165 aa)
	LOC105102486	40S ribosomal protein S4. (263 aa)
	FASTKD2	FAST kinase domain-containing protein 2. (706 aa)
	RPL37	60S ribosomal protein L37. (97 aa)
	DDX28	Putative ATP-dependent RNA helicase DDX28. (538 aa)
	SBDS	Ribosome maturation protein SBDS. (250 aa)
	ENSCDRP00005024867	annotation not available (312 aa)
	LIPE	Hormone-sensitive lipase. (811 aa)
	RCC1L	RCC1-like G exchanging factor-like protein. (465 aa)
	ENSCDRP00005025681	annotation not available (77 aa)
	DDX21	Nucleolar RNA helicase 2. (775 aa)
	RPUSD4	Mitochondrial RNA pseudouridine synthase RPUSD4. (376 aa)
	ENSCDRP00005032434	LOW QUALITY PROTEIN: uncharacterized protein LOC116150063. (69 aa)
	GTF3A	General transcription factor IIIA. (417 aa)
	UTP23	rRNA-processing protein UTP23-like protein. (248 aa)
	MTERF4	Transcription termination factor 4, mitochondrial. (345 aa)
	RPS18	40S ribosomal protein S18. (152 aa)
	TACO1	Translational activator of cytochrome c oxidase 1. (292 aa)
	RRS1	Ribosome biogenesis regulatory protein homolog. (365 aa)
	MRPS11	28S ribosomal protein S11. (196 aa)
	RPL23	60S ribosomal protein L23. (140 aa)
	EMG1	Ribosomal RNA small subunit methyltransferase NEP1. (244 aa)
	UTP25	Digestive organ expansion factor-like protein. (759 aa)
	NSUN4	5-methylcytosine rRNA methyltransferase NSUN4. (384 aa)
	RPL11	60S ribosomal protein L11. (272 aa)
	RPLP0	60S acidic ribosomal protein P0. (319 aa)
	LOC105091624	40S ribosomal protein S4. (263 aa)
	IMP4	U3 small nucleolar ribonucleoprotein IMP4. (291 aa)
	MRPS6	28S ribosomal protein S6, mitochondrial. (271 aa)
	RPS9	40S ribosomal protein S9. (194 aa)
	Cadr_000010842	60S ribosomal protein L9. (116 aa)
	AKNAD1	Protein AKNAD1. (703 aa)
	ENSCDRP00005004638	annotation not available (130 aa)
	RPS3	Small subunit ribosomal protein S3e. (289 aa)
	MRPS27	28S ribosomal protein S27. (608 aa)
	Cadr_000000962	Ribosome maturation protein SBDS. (250 aa)
	IMP3	U3 small nucleolar ribonucleoprotein IMP3. (184 aa)
	MRPS7	28S ribosomal protein S7. (242 aa)
	RPF2	Ribosome production factor 2-like protein. (305 aa)
	MRPS18C	28S ribosomal protein S18c. (143 aa)
	CAVIN1	Caveolae-associated protein 1. (390 aa)
	Cadr_000025379	Suppressor of SWI4 1-like protein. (469 aa)
	MRPL20	39S ribosomal protein L20. (149 aa)
	MRPL16	39S ribosomal protein L16. (302 aa)
	ENSCDRP00005001068	annotation not available (56 aa)
	NOP53	Ribosome biogenesis protein NOP53. (485 aa)
	Cadr_000010755	60S acidic ribosomal protein P0-like. (290 aa)

Your Current Organism:

Camelus dromedarius

NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKNAD1	BRIX1	ENSCDRP00005004577	ENSCDRP00005002399	Protein AKNAD1.	Ribosome biogenesis protein BRX1-like protein.	0.542
AKNAD1	CCDC105	ENSCDRP00005004577	ENSCDRP00005017257	Protein AKNAD1.	Coiled-coil domain-containing protein 105.	0.725
AKNAD1	Cadr_000000092	ENSCDRP00005004577	ENSCDRP00005013945	Protein AKNAD1.	60S ribosomal protein L9.	0.767
AKNAD1	Cadr_000010755	ENSCDRP00005004577	ENSCDRP00005001818	Protein AKNAD1.	60S acidic ribosomal protein P0-like.	0.808
AKNAD1	Cadr_000010842	ENSCDRP00005004577	ENSCDRP00005004542	Protein AKNAD1.	60S ribosomal protein L9.	0.767
AKNAD1	ENSCDRP00005001068	ENSCDRP00005004577	ENSCDRP00005001068	Protein AKNAD1.	annotation not available	0.734
AKNAD1	ENSCDRP00005004638	ENSCDRP00005004577	ENSCDRP00005004638	Protein AKNAD1.	annotation not available	0.863
AKNAD1	ENSCDRP00005010692	ENSCDRP00005004577	ENSCDRP00005010692	Protein AKNAD1.	annotation not available	0.798
AKNAD1	ENSCDRP00005019321	ENSCDRP00005004577	ENSCDRP00005019321	Protein AKNAD1.	annotation not available	0.773
AKNAD1	IMP3	ENSCDRP00005004577	ENSCDRP00005005461	Protein AKNAD1.	U3 small nucleolar ribonucleoprotein IMP3.	0.497
AKNAD1	LOC105091624	ENSCDRP00005004577	ENSCDRP00005003526	Protein AKNAD1.	40S ribosomal protein S4.	0.766
AKNAD1	LOC105102486	ENSCDRP00005004577	ENSCDRP00005023117	Protein AKNAD1.	40S ribosomal protein S4.	0.766
AKNAD1	MRPS11	ENSCDRP00005004577	ENSCDRP00005029826	Protein AKNAD1.	28S ribosomal protein S11.	0.492
AKNAD1	MRPS7	ENSCDRP00005004577	ENSCDRP00005009952	Protein AKNAD1.	28S ribosomal protein S7.	0.725
AKNAD1	NOP53	ENSCDRP00005004577	ENSCDRP00005001758	Protein AKNAD1.	Ribosome biogenesis protein NOP53.	0.575
AKNAD1	RPF1	ENSCDRP00005004577	ENSCDRP00005015329	Protein AKNAD1.	Ribosome production factor 1.	0.528
AKNAD1	RPF2	ENSCDRP00005004577	ENSCDRP00005005723	Protein AKNAD1.	Ribosome production factor 2-like protein.	0.441
AKNAD1	RPL11	ENSCDRP00005004577	ENSCDRP00005026609	Protein AKNAD1.	60S ribosomal protein L11.	0.932
AKNAD1	RPL12	ENSCDRP00005004577	ENSCDRP00005021054	Protein AKNAD1.	60S ribosomal protein L12.	0.654
AKNAD1	RPL23	ENSCDRP00005004577	ENSCDRP00005029058	Protein AKNAD1.	60S ribosomal protein L23.	0.863