(33 nodes) Main axon network (Camelus dromedarius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KCNA2	Potassium voltage-gated channel subfamily A member 2. (499 aa)
	ERMN	Ermin. (282 aa)
	KCNAB1	Potassium voltage-gated channel Shaker-related subfamily A, beta member 1. (419 aa)
	SPOCK1	Testican-1. (439 aa)
	C9orf72	Guanine nucleotide exchange C9orf72. (481 aa)
	NCMAP	Noncompact myelin-associated protein. (102 aa)
	TRIM46	Tripartite motif-containing protein 46. (799 aa)
	SCN1A	Sodium channel protein type 1 subunit alpha. (2008 aa)
	KCNQ3	Potassium voltage-gated channel subfamily KQT member 3. (751 aa)
	MAG	Myelin-associated glycoprotein. (688 aa)
	DAGLA	Sn1-specific diacylglycerol lipase alpha. (1072 aa)
	UCN	Urocortin. (199 aa)
	KCNA1	Potassium voltage-gated channel subfamily A member 1. (495 aa)
	KCNQ2	Potassium voltage-gated channel subfamily KQT member 2. (708 aa)
	ENSCDRP00005014345	annotation not available (147 aa)
	MBP	Myelin basic protein isoform X1. (332 aa)
	ENSCDRP00005015618	annotation not available (620 aa)
	SPTBN4	Spectrin beta chain. (675 aa)
	MYOC	Myocilin. (490 aa)
	CNTN2	Contactin-2. (1040 aa)
	HAPLN2	Hyaluronan and proteoglycan link protein 2. (340 aa)
	KCNC1	Potassium voltage-gated channel subfamily C member 3. (585 aa)
	KCNAB2	Voltage-gated potassium channel subunit beta-2. (420 aa)
	SLC1A2	Excitatory amino acid transporter 2. (614 aa)
	TNFRSF1B	Tumor necrosis factor receptor superfamily member 1B. (492 aa)
	MYO1D	Unconventional myosin-Id. (1035 aa)
	SPTBN5	Spectrin beta chain. (3498 aa)
	DLG1	Disks large homolog 1 isoform X1. (939 aa)
	KCNA4	Potassium voltage-gated channel subfamily A member 4. (654 aa)
	DLG4	Disks large-like protein 4. (767 aa)
	NAV1	Neuron navigator 1. (1815 aa)
	Cadr_000023034	Uncharacterized protein. (236 aa)
	SPTBN1	Spectrin beta chain. (2364 aa)

Your Current Organism:

Camelus dromedarius

NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cadr_000023034	NAV1	ENSCDRP00005031576	ENSCDRP00005031542	Uncharacterized protein.	Neuron navigator 1.	0.899
DLG1	DLG4	ENSCDRP00005028248	ENSCDRP00005029877	Disks large homolog 1 isoform X1.	Disks large-like protein 4.	0.948
DLG4	DLG1	ENSCDRP00005029877	ENSCDRP00005028248	Disks large-like protein 4.	Disks large homolog 1 isoform X1.	0.948
ENSCDRP00005014345	SCN1A	ENSCDRP00005014345	ENSCDRP00005008046	annotation not available	Sodium channel protein type 1 subunit alpha.	0.637
ENSCDRP00005015618	SPTBN4	ENSCDRP00005015618	ENSCDRP00005015685	annotation not available	Spectrin beta chain.	0.900
ERMN	HAPLN2	ENSCDRP00005001906	ENSCDRP00005019382	Ermin.	Hyaluronan and proteoglycan link protein 2.	0.685
ERMN	MAG	ENSCDRP00005001906	ENSCDRP00005009870	Ermin.	Myelin-associated glycoprotein.	0.518
ERMN	MBP	ENSCDRP00005001906	ENSCDRP00005015385	Ermin.	Myelin basic protein isoform X1.	0.606
HAPLN2	ERMN	ENSCDRP00005019382	ENSCDRP00005001906	Hyaluronan and proteoglycan link protein 2.	Ermin.	0.685
KCNA1	KCNAB1	ENSCDRP00005012735	ENSCDRP00005002274	Potassium voltage-gated channel subfamily A member 1.	Potassium voltage-gated channel Shaker-related subfamily A, beta member 1.	0.765
KCNA1	KCNAB2	ENSCDRP00005012735	ENSCDRP00005022459	Potassium voltage-gated channel subfamily A member 1.	Voltage-gated potassium channel subunit beta-2.	0.845
KCNA1	SCN1A	ENSCDRP00005012735	ENSCDRP00005008046	Potassium voltage-gated channel subfamily A member 1.	Sodium channel protein type 1 subunit alpha.	0.640
KCNA2	KCNAB1	ENSCDRP00005001878	ENSCDRP00005002274	Potassium voltage-gated channel subfamily A member 2.	Potassium voltage-gated channel Shaker-related subfamily A, beta member 1.	0.811
KCNA2	KCNAB2	ENSCDRP00005001878	ENSCDRP00005022459	Potassium voltage-gated channel subfamily A member 2.	Voltage-gated potassium channel subunit beta-2.	0.776
KCNA2	SCN1A	ENSCDRP00005001878	ENSCDRP00005008046	Potassium voltage-gated channel subfamily A member 2.	Sodium channel protein type 1 subunit alpha.	0.445
KCNA4	KCNAB1	ENSCDRP00005029383	ENSCDRP00005002274	Potassium voltage-gated channel subfamily A member 4.	Potassium voltage-gated channel Shaker-related subfamily A, beta member 1.	0.738
KCNA4	KCNAB2	ENSCDRP00005029383	ENSCDRP00005022459	Potassium voltage-gated channel subfamily A member 4.	Voltage-gated potassium channel subunit beta-2.	0.770
KCNAB1	KCNA1	ENSCDRP00005002274	ENSCDRP00005012735	Potassium voltage-gated channel Shaker-related subfamily A, beta member 1.	Potassium voltage-gated channel subfamily A member 1.	0.765
KCNAB1	KCNA2	ENSCDRP00005002274	ENSCDRP00005001878	Potassium voltage-gated channel Shaker-related subfamily A, beta member 1.	Potassium voltage-gated channel subfamily A member 2.	0.811
KCNAB1	KCNA4	ENSCDRP00005002274	ENSCDRP00005029383	Potassium voltage-gated channel Shaker-related subfamily A, beta member 1.	Potassium voltage-gated channel subfamily A member 4.	0.738