(19 nodes) ER to Golgi transport vesicle membrane network (Camelus dromedarius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEF1	Peflin. (302 aa)
	VMA21	Vacuolar ATPase assembly integral membrane protein VMA21. (201 aa)
	SEC24A	Protein transport protein Sec24A. (1097 aa)
	KLHL12	Kelch-like protein 12. (568 aa)
	SEC23A	Protein transport protein Sec23A. (765 aa)
	WDR86	WD repeat-containing protein 86. (468 aa)
	PDCD6	Programmed cell death protein 6. (187 aa)
	SCAP	Sterol regulatory element-binding protein cleavage-activating protein. (1280 aa)
	SEC24B	Protein transport protein Sec24B. (1239 aa)
	ENSCDRP00005009206	annotation not available (123 aa)
	SEC31B	Protein transport protein Sec31B. (1230 aa)
	ENSCDRP00005023052	annotation not available (102 aa)
	SEC24C	Protein transport protein Sec24C. (1113 aa)
	SAR1A	GTP-binding protein SAR1a. (198 aa)
	SAR1B	GTP-binding protein SAR1b. (198 aa)
	ENSCDRP00005009158	annotation not available (123 aa)
	SEC24D	Protein transport protein Sec24D. (1032 aa)
	SEC23B	Protein transport protein Sec23B. (767 aa)
	SEC31A	Protein transport protein Sec31A. (1251 aa)

Your Current Organism:

Camelus dromedarius

NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCDRP00005009158	SEC31A	ENSCDRP00005009158	ENSCDRP00005004792	annotation not available	Protein transport protein Sec31A.	0.504
ENSCDRP00005009158	SEC31B	ENSCDRP00005009158	ENSCDRP00005027627	annotation not available	Protein transport protein Sec31B.	0.504
ENSCDRP00005009206	SEC31A	ENSCDRP00005009206	ENSCDRP00005004792	annotation not available	Protein transport protein Sec31A.	0.504
ENSCDRP00005009206	SEC31B	ENSCDRP00005009206	ENSCDRP00005027627	annotation not available	Protein transport protein Sec31B.	0.504
KLHL12	PDCD6	ENSCDRP00005028658	ENSCDRP00005021066	Kelch-like protein 12.	Programmed cell death protein 6.	0.467
KLHL12	PEF1	ENSCDRP00005028658	ENSCDRP00005025555	Kelch-like protein 12.	Peflin.	0.771
KLHL12	SAR1B	ENSCDRP00005028658	ENSCDRP00005003893	Kelch-like protein 12.	GTP-binding protein SAR1b.	0.428
KLHL12	SEC23B	ENSCDRP00005028658	ENSCDRP00005005048	Kelch-like protein 12.	Protein transport protein Sec23B.	0.448
KLHL12	SEC24D	ENSCDRP00005028658	ENSCDRP00005005976	Kelch-like protein 12.	Protein transport protein Sec24D.	0.441
KLHL12	SEC31A	ENSCDRP00005028658	ENSCDRP00005004792	Kelch-like protein 12.	Protein transport protein Sec31A.	0.803
KLHL12	SEC31B	ENSCDRP00005028658	ENSCDRP00005027627	Kelch-like protein 12.	Protein transport protein Sec31B.	0.460
PDCD6	KLHL12	ENSCDRP00005021066	ENSCDRP00005028658	Programmed cell death protein 6.	Kelch-like protein 12.	0.467
PDCD6	SEC31A	ENSCDRP00005021066	ENSCDRP00005004792	Programmed cell death protein 6.	Protein transport protein Sec31A.	0.514
PDCD6	SEC31B	ENSCDRP00005021066	ENSCDRP00005027627	Programmed cell death protein 6.	Protein transport protein Sec31B.	0.514
PEF1	KLHL12	ENSCDRP00005025555	ENSCDRP00005028658	Peflin.	Kelch-like protein 12.	0.771
PEF1	SAR1B	ENSCDRP00005025555	ENSCDRP00005003893	Peflin.	GTP-binding protein SAR1b.	0.450
PEF1	SEC31A	ENSCDRP00005025555	ENSCDRP00005004792	Peflin.	Protein transport protein Sec31A.	0.687
PEF1	SEC31B	ENSCDRP00005025555	ENSCDRP00005027627	Peflin.	Protein transport protein Sec31B.	0.526
SAR1A	SAR1B	ENSCDRP00005012203	ENSCDRP00005003893	GTP-binding protein SAR1a.	GTP-binding protein SAR1b.	0.900
SAR1A	SEC23A	ENSCDRP00005012203	ENSCDRP00005026810	GTP-binding protein SAR1a.	Protein transport protein Sec23A.	0.861