9 items (Camelus dromedarius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACTB	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (378 aa)
	JCHAIN	Immunoglobulin J chain. (191 aa)
	CD63	CD63 antigen. (265 aa)
	CANX	Calnexin. (593 aa)
	CD9	CD9 antigen. (247 aa)
	SUGCT	Succinate--hydroxymethylglutarate CoA-transferase isoform X1. (445 aa)
	TSG101	Tumor susceptibility gene 101 protein. (391 aa)
	CCT3	T-complex protein 1 subunit gamma. (545 aa)
	XPO4	Exportin-4. (1150 aa)

Your Current Organism:

Camelus dromedarius

NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	CANX	ENSCDRP00005026436	ENSCDRP00005008002	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	Calnexin.	0.576
ACTB	CCT3	ENSCDRP00005026436	ENSCDRP00005018113	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	T-complex protein 1 subunit gamma.	0.522
ACTB	CD63	ENSCDRP00005026436	ENSCDRP00005005775	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	CD63 antigen.	0.571
ACTB	TSG101	ENSCDRP00005026436	ENSCDRP00005017114	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	Tumor susceptibility gene 101 protein.	0.552
CANX	ACTB	ENSCDRP00005008002	ENSCDRP00005026436	Calnexin.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.576
CANX	CD63	ENSCDRP00005008002	ENSCDRP00005005775	Calnexin.	CD63 antigen.	0.858
CANX	CD9	ENSCDRP00005008002	ENSCDRP00005014980	Calnexin.	CD9 antigen.	0.730
CANX	TSG101	ENSCDRP00005008002	ENSCDRP00005017114	Calnexin.	Tumor susceptibility gene 101 protein.	0.764
CANX	XPO4	ENSCDRP00005008002	ENSCDRP00005024639	Calnexin.	Exportin-4.	0.461
CCT3	ACTB	ENSCDRP00005018113	ENSCDRP00005026436	T-complex protein 1 subunit gamma.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.522
CCT3	SUGCT	ENSCDRP00005018113	ENSCDRP00005016932	T-complex protein 1 subunit gamma.	Succinate--hydroxymethylglutarate CoA-transferase isoform X1.	0.583
CCT3	XPO4	ENSCDRP00005018113	ENSCDRP00005024639	T-complex protein 1 subunit gamma.	Exportin-4.	0.572
CD63	ACTB	ENSCDRP00005005775	ENSCDRP00005026436	CD63 antigen.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.571
CD63	CANX	ENSCDRP00005005775	ENSCDRP00005008002	CD63 antigen.	Calnexin.	0.858
CD63	CD9	ENSCDRP00005005775	ENSCDRP00005014980	CD63 antigen.	CD9 antigen.	0.714
CD63	TSG101	ENSCDRP00005005775	ENSCDRP00005017114	CD63 antigen.	Tumor susceptibility gene 101 protein.	0.965
CD9	CANX	ENSCDRP00005014980	ENSCDRP00005008002	CD9 antigen.	Calnexin.	0.730
CD9	CD63	ENSCDRP00005014980	ENSCDRP00005005775	CD9 antigen.	CD63 antigen.	0.714
CD9	TSG101	ENSCDRP00005014980	ENSCDRP00005017114	CD9 antigen.	Tumor susceptibility gene 101 protein.	0.946
SUGCT	CCT3	ENSCDRP00005016932	ENSCDRP00005018113	Succinate--hydroxymethylglutarate CoA-transferase isoform X1.	T-complex protein 1 subunit gamma.	0.583