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argC argC RGE_05250 RGE_05250 lysA lysA RGE_08140 RGE_08140 arcC arcC argB argB argJ argJ argG argG asd asd argF argF argD argD argE argE argD-2 argD-2 rocF rocF argA argA RGE_28290 RGE_28290 lysC lysC dapA dapA argH argH RGE_37050 RGE_37050 RGE_37670 RGE_37670 dapB dapB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
argCN-acetyl-gamma-glutamyl-phosphate reductase ArgC; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. (312 aa)
RGE_05250Putative dihydrodipicolinate synthase; Belongs to the DapA family. (309 aa)
lysADiaminopimelate decarboxylase LysA; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (424 aa)
RGE_08140Hypothetical protein. (39 aa)
arcCCarbamate kinase ArcC. (347 aa)
argBAcetylglutamate kinase ArgB; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (303 aa)
argJArginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (409 aa)
argGArgininosuccinate synthase ArgG; Protein synonym:citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. (447 aa)
asdAspartate-semialdehyde dehydrogenase Asd; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (377 aa)
argFOrnithine carbamoyltransferase ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (310 aa)
argDAcetylornithine aminotransferase ArgD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (402 aa)
argEAcetylornithine deacetylase ArgE; Protein synonym:acetylornithinase. (393 aa)
argD-2Acetylornithine aminotransferase ArgD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (410 aa)
rocFArginase RocF; Belongs to the arginase family. (270 aa)
argAAmino-acid acetyltransferase ArgA; Belongs to the acetyltransferase family. ArgA subfamily. (446 aa)
RGE_28290Orn/lys/arg decarboxylase. (754 aa)
lysCAspartokinase LysC; Protein synonym:aspartate kinase; Belongs to the aspartokinase family. (424 aa)
dapADihydrodipicolinate synthase DapA; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (293 aa)
argHArgininosuccinate lyase ArgH; Protein synonym:arginosuccinase. (466 aa)
RGE_37050Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (389 aa)
RGE_37670Arginase; Belongs to the arginase family. (309 aa)
dapBDihydrodipicolinate reductase DapB; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (267 aa)
Your Current Organism:
Rubrivivax gelatinosus
NCBI taxonomy Id: 983917
Other names: R. gelatinosus IL144, Rubrivivax gelatinosus IL144, Rubrivivax gelatinosus str. IL144, Rubrivivax gelatinosus strain IL144
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