Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ilvA | sdaA | RGE_08060 | RGE_07090 | Threonine dehydratase IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.920 |
| ilvA | sdaA-2 | RGE_08060 | RGE_15930 | Threonine dehydratase IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.920 |
| ilvA | serB | RGE_08060 | RGE_26930 | Threonine dehydratase IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Phosphoserine phosphatase SerB. | 0.905 |
| ilvA | trpB-2 | RGE_08060 | RGE_26940 | Threonine dehydratase IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Putative tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.903 |
| sdaA | ilvA | RGE_07090 | RGE_08060 | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Threonine dehydratase IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.920 |
| sdaA | sdaA-2 | RGE_07090 | RGE_15930 | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.905 |
| sdaA | serB | RGE_07090 | RGE_26930 | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Phosphoserine phosphatase SerB. | 0.914 |
| sdaA | trpB-2 | RGE_07090 | RGE_26940 | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Putative tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.900 |
| sdaA-2 | ilvA | RGE_15930 | RGE_08060 | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Threonine dehydratase IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.920 |
| sdaA-2 | sdaA | RGE_15930 | RGE_07090 | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.905 |
| sdaA-2 | serB | RGE_15930 | RGE_26930 | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Phosphoserine phosphatase SerB. | 0.914 |
| sdaA-2 | trpB-2 | RGE_15930 | RGE_26940 | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Putative tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.900 |
| serB | ilvA | RGE_26930 | RGE_08060 | Phosphoserine phosphatase SerB. | Threonine dehydratase IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.905 |
| serB | sdaA | RGE_26930 | RGE_07090 | Phosphoserine phosphatase SerB. | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.914 |
| serB | sdaA-2 | RGE_26930 | RGE_15930 | Phosphoserine phosphatase SerB. | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.914 |
| serB | trpB-2 | RGE_26930 | RGE_26940 | Phosphoserine phosphatase SerB. | Putative tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.951 |
| trpB-2 | ilvA | RGE_26940 | RGE_08060 | Putative tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Threonine dehydratase IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.903 |
| trpB-2 | sdaA | RGE_26940 | RGE_07090 | Putative tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.900 |
| trpB-2 | sdaA-2 | RGE_26940 | RGE_15930 | Putative tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | L-serine dehydratase SdaA; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.900 |
| trpB-2 | serB | RGE_26940 | RGE_26930 | Putative tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Phosphoserine phosphatase SerB. | 0.951 |