Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RGE_00290 | RGE_00300 | RGE_00290 | RGE_00300 | Carbon monoxide dehydrogenase subunit G (CoxG) family protein. | Hypothetical protein. | 0.453 |
| RGE_00290 | RGE_39290 | RGE_00290 | RGE_39290 | Carbon monoxide dehydrogenase subunit G (CoxG) family protein. | vWA domain containing CoxE-like family protein. | 0.803 |
| RGE_00290 | coxD | RGE_00290 | RGE_39270 | Carbon monoxide dehydrogenase subunit G (CoxG) family protein. | Carbon monoxide dehydrogenase, CoxD accessory protein. | 0.788 |
| RGE_00290 | coxL | RGE_00290 | RGE_39250 | Carbon monoxide dehydrogenase subunit G (CoxG) family protein. | Carbon monoxide dehydrogenase large chain CoxL. | 0.975 |
| RGE_00290 | coxM | RGE_00290 | RGE_39260 | Carbon monoxide dehydrogenase subunit G (CoxG) family protein. | Carbon monoxide dehydrogenase, medium subunit CoxM. | 0.840 |
| RGE_00290 | coxS | RGE_00290 | RGE_39240 | Carbon monoxide dehydrogenase subunit G (CoxG) family protein. | Carbon monoxide dehydrogenase, small subunit CoxS. | 0.492 |
| RGE_00300 | RGE_00290 | RGE_00300 | RGE_00290 | Hypothetical protein. | Carbon monoxide dehydrogenase subunit G (CoxG) family protein. | 0.453 |
| RGE_00810 | lrp | RGE_00810 | RGE_00820 | Hypothetical protein. | Leucine-responsive transcriptional regulator Lrp. | 0.486 |
| RGE_01170 | RGE_01180 | RGE_01170 | RGE_01180 | Putative ABC transporter permease protein. | ABC transporter ATP-binding protein. | 0.977 |
| RGE_01170 | RGE_01190 | RGE_01170 | RGE_01190 | Putative ABC transporter permease protein. | Putative ABC transporter substrate binding protein. | 0.967 |
| RGE_01170 | RGE_25240 | RGE_01170 | RGE_25240 | Putative ABC transporter permease protein. | Xenobiotic compound monooxygenase, DszA family, A subunit. | 0.461 |
| RGE_01170 | RGE_31400 | RGE_01170 | RGE_31400 | Putative ABC transporter permease protein. | Putative ABC transporter ATP-binding protein. | 0.820 |
| RGE_01170 | RGE_39810 | RGE_01170 | RGE_39810 | Putative ABC transporter permease protein. | ABC transporter ATP-binding protein. | 0.832 |
| RGE_01170 | RGE_39820 | RGE_01170 | RGE_39820 | Putative ABC transporter permease protein. | NMT1/THI5 like domain protein. | 0.695 |
| RGE_01170 | ssuA | RGE_01170 | RGE_25360 | Putative ABC transporter permease protein. | Putative aliphatic sulfonate-binding protein. | 0.840 |
| RGE_01170 | ssuA-2 | RGE_01170 | RGE_25390 | Putative ABC transporter permease protein. | Putative aliphatic sulfonate-binding protein. | 0.833 |
| RGE_01170 | ssuB | RGE_01170 | RGE_25420 | Putative ABC transporter permease protein. | Aliphatic sulfonate import ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.791 |
| RGE_01170 | ssuC | RGE_01170 | RGE_25410 | Putative ABC transporter permease protein. | Aliphatic sulfonate ABC transporter, permease protein SsuC. | 0.466 |
| RGE_01170 | ssuD | RGE_01170 | RGE_25400 | Putative ABC transporter permease protein. | Alkanesulfonate monooxygenase SsuD; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.529 |
| RGE_01170 | tauA | RGE_01170 | RGE_25320 | Putative ABC transporter permease protein. | Taurine ABC transporter substrate binding protein TauA. | 0.932 |
page 1 of 48