STRINGSTRING
RGE_00290 RGE_00290 RGE_02190 RGE_02190 RGE_02200 RGE_02200 RGE_12230 RGE_12230 RGE_20220 RGE_20220 RGE_23100 RGE_23100 cimH cimH RGE_23120 RGE_23120 citC citC citD citD citE citE citF citF citX citX citG citG citA citA citB citB RGE_23210 RGE_23210 RGE_23220 RGE_23220 iorA iorA iorB iorB RGE_23250 RGE_23250 RGE_30150 RGE_30150 RGE_30160 RGE_30160 coxS coxS coxL coxL coxM coxM coxD coxD RGE_39290 RGE_39290
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RGE_00290Carbon monoxide dehydrogenase subunit G (CoxG) family protein. (210 aa)
RGE_02190Hypothetical protein. (177 aa)
RGE_02200XdhC/CoxI family protein. (336 aa)
RGE_12230Putative lyase; Belongs to the HpcH/HpaI aldolase family. (337 aa)
RGE_20220Putative lyase. (149 aa)
RGE_23100Hypothetical protein. (139 aa)
cimHCitrate/malate transporter. (425 aa)
RGE_23120Putative isomerase/hydrolase. (299 aa)
citCCitrate lyase synthetase CitC; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase. (351 aa)
citDCitrate lyase acyl carrier protein CitD; Covalent carrier of the coenzyme of citrate lyase. (98 aa)
citECitrate lyase beta subunit CitE; Belongs to the HpcH/HpaI aldolase family. (290 aa)
citFCitrate lyase alpha subunit CitF. (506 aa)
citXApo-citrate lyase phosphoribosyl-dephospho-CoA transferase citX. (180 aa)
citGPutative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase CitG. (302 aa)
citASensor kinase CitA. (563 aa)
citBTranscriptional regulator CitB. (234 aa)
RGE_23210Hypothetical protein. (197 aa)
RGE_23220Hypothetical protein. (222 aa)
iorAIsoquinoline 1-oxidoreductase subunit alpha IorA. (152 aa)
iorBIsoquinoline 1-oxidoreductase subunit beta IorB. (740 aa)
RGE_23250Putative lyase. (155 aa)
RGE_30150Hypothetical protein. (256 aa)
RGE_30160Putative lyase. (131 aa)
coxSCarbon monoxide dehydrogenase, small subunit CoxS. (155 aa)
coxLCarbon monoxide dehydrogenase large chain CoxL. (781 aa)
coxMCarbon monoxide dehydrogenase, medium subunit CoxM. (265 aa)
coxDCarbon monoxide dehydrogenase, CoxD accessory protein. (303 aa)
RGE_39290vWA domain containing CoxE-like family protein. (399 aa)
Your Current Organism:
Rubrivivax gelatinosus
NCBI taxonomy Id: 983917
Other names: R. gelatinosus IL144, Rubrivivax gelatinosus IL144, Rubrivivax gelatinosus str. IL144, Rubrivivax gelatinosus strain IL144
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.