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odhL odhL odhA odhA glgX glgX RGE_31760 RGE_31760 edd edd cbbA-2 cbbA-2 cbbE cbbE RGE_36290 RGE_36290 bplA bplA gpmA gpmA gpmB gpmB deoC deoC gpmB-2 gpmB-2 pulA pulA rpe rpe pgk pgk pyk pyk cbbA cbbA kduI kduI RGE_05970 RGE_05970 RGE_07400 RGE_07400 pfp pfp RGE_08360 RGE_08360 pgi pgi pfkA pfkA eno eno cobC cobC tpiA tpiA rbsD rbsD aceE aceE RGE_22610 RGE_22610 aceE-2 aceE-2 aceF aceF RGE_24180 RGE_24180 suyB suyB RGE_25220 RGE_25220 glpK glpK glk-2 glk-2 glk glk
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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odhL2-oxoglutarate dehydrogenase E3 component OdhL. (472 aa)
odhA2-oxoglutarate dehydrogenase E1 component OdhA. (952 aa)
glgXGlycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family. (687 aa)
RGE_31760Hypothetical protein. (283 aa)
eddPhosphogluconate dehydratase Edd; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (604 aa)
cbbA-2Fructose-bisphosphate aldolase CbbA; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (337 aa)
cbbERibulose-5-phosphate 3-epimerase CbbE; Belongs to the ribulose-phosphate 3-epimerase family. (225 aa)
RGE_36290Putative oxidoreductase. (352 aa)
bplAPutative oxidoreductase BplA/WlbA. (354 aa)
gpmA2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (247 aa)
gpmBPutative phosphoglycerate mutase GpmB; Belongs to the phosphoglycerate mutase family. (212 aa)
deoCDeoxyribose-phosphate aldolase DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (246 aa)
gpmB-2Putative phosphoglycerate mutase GpmB. (214 aa)
pulAPullulanase; Belongs to the glycosyl hydrolase 13 family. (1175 aa)
rpeRibulose-phosphate 3-epimerase Rpe; Protein synonym:pentose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (220 aa)
pgkPhosphoglycerate kinase Pgk; Belongs to the phosphoglycerate kinase family. (397 aa)
pykPyruvate kinase Pyk; Belongs to the pyruvate kinase family. (475 aa)
cbbAFructose-bisphosphate aldolase CbbA; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (354 aa)
kduI5-keto-4-deoxyuronate isomerase KduI; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (280 aa)
RGE_05970SlyX family protein. (79 aa)
RGE_07400Hypothetical protein. (384 aa)
pfp6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. (405 aa)
RGE_08360Transcriptional regulator, RpiR family. (298 aa)
pgiGlucose-6-phosphate isomerase Pgi; Protein synonym:phosphoglucose isomerase; protein synonym:phosphohexose isomerase; Belongs to the GPI family. (529 aa)
pfkA6-phosphofructokinase PfkA; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. (354 aa)
enoEnolase Eno; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (427 aa)
cobCPutative alpha-ribazole phosphatase CobC. (178 aa)
tpiATriosephosphate isomerase TpiA; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (246 aa)
rbsDHigh affinity ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (131 aa)
aceEPyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (864 aa)
RGE_22610Putative pyruvate kinase. (619 aa)
aceE-2Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (900 aa)
aceFDihydrolipoamide acetyltransferase AceF; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (563 aa)
RGE_24180Dehydrogenase. (334 aa)
suyBSulfolactate sulfo-lyase large subunit SuyB. (391 aa)
RGE_25220Hypothetical protein. (93 aa)
glpKGlycerol kinase GlpK; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (498 aa)
glk-2Putative glucokinase/RipR family transcriptional regulator; Bifunctional protein; Belongs to the bacterial glucokinase family. (636 aa)
glkGlucokinase Glk; Belongs to the bacterial glucokinase family. (340 aa)
Your Current Organism:
Rubrivivax gelatinosus
NCBI taxonomy Id: 983917
Other names: R. gelatinosus IL144, Rubrivivax gelatinosus IL144, Rubrivivax gelatinosus str. IL144, Rubrivivax gelatinosus strain IL144
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