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hemY hemY hemN-2 hemN-2 RGE_33780 RGE_33780 bchX bchX bchY bchY bchZ bchZ crtA crtA crtC crtC acsF acsF lhaA lhaA bchL bchL RGE_21610 RGE_21610 cobF cobF RGE_19080 RGE_19080 cobB cobB cobM cobM cbiG cbiG cobL cobL cobK cobK cobJ cobJ cobI cobI cobH cobH nirG nirG nirH nirH nirN nirN cobT cobT cysG cysG cobA cobA nifH nifH hemH hemH pucC pucC cobD cobD cbiX cbiX RGE_29420 RGE_29420 hemN hemN RGE_33400 RGE_33400 bchG bchG bchF bchF bchN bchN bchB bchB nirDL nirDL nirE nirE RGE_04870 RGE_04870 hemE hemE bchI bchI cobS cobS cobT-2 cobT-2 cobQ cobQ cobU cobU RGE_14540 RGE_14540 cbiB cbiB hemL hemL bchD bchD bchJ bchJ RGE_44550 RGE_44550 cobO cobO RGE_44500 RGE_44500 RGE_44510 RGE_44510 cobU-2 cobU-2 cobQ-3 cobQ-3 cobQ-2 cobQ-2 hemB hemB RGE_44140 RGE_44140 nifK-2 nifK-2 nifH-2 nifH-2 hemA hemA hemL-2 hemL-2 ctaA ctaA ctaB ctaB RGE_38910 RGE_38910 hemF hemF hemC hemC hemD hemD
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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hemYPutative protoporphyrinogen IX and coproporphyrinogen III oxidase HemY. (417 aa)
hemN-2Oxygen-independent coproporphyrinogen III oxidase HemN; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (404 aa)
RGE_33780HemN C-terminal domain containing protein; Protein synonym:ORF468; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (468 aa)
bchXBacteriochlorophyllide reductase subunit X BchX; Belongs to the NifH/BchL/ChlL family. (334 aa)
bchYBacteriochlorophyllide reductase subunit Y BchY. (510 aa)
bchZBacteriochlorophyllide reductase subunit BchZ; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole; Belongs to the ChlB/BchB/BchZ family. (487 aa)
crtASpirilloxanthin and/or spheroidene monooxygenase CrtA. (256 aa)
crtCHydroxyneurosporene dehydrogenase CrtC. (406 aa)
acsFMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase AcsF; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in aerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13- monomethyl ester (MgPMME) (By similarity); Belongs to the AcsF family. (358 aa)
lhaALight-harvesting 1 (B870) complex assembly protein LhaA. (482 aa)
bchLLight-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (302 aa)
RGE_21610Von Willebrand factor type A. (340 aa)
cobFprecorrin-6A synthase CobF. (249 aa)
RGE_19080Tetrapyrrole methylase family protein. (844 aa)
cobBCobyrinic acid A,C-diamide synthase CobB; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (441 aa)
cobMPrecorrin-4 C11-methyltransferase CobM; Belongs to the precorrin methyltransferase family. (260 aa)
cbiGPutative cobalamin biosynthesis protein CbiG. (123 aa)
cobLPutative precorrin-6y C5,15-methyltransferase CobL. (393 aa)
cobKprecorrin-6A reductase CobK. (247 aa)
cobJprecorrin-3B C(17)-methyltransferase CobJ. (243 aa)
cobIPrecorrin-2 C20-methyltransferase CobI; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. (241 aa)
cobHprecorrin-8X methylmutase CobH. (209 aa)
nirGHeme d1 biosynthesis protein NirG. (164 aa)
nirHHeme d1 biosynthesis protein NirH. (160 aa)
nirNHeme d1 biosynthesis protein NirN. (532 aa)
cobTNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT. (360 aa)
cysGSiroheme synthase CysG. (260 aa)
cobAuroporphyrin-III C-methyltransferase CobA. (246 aa)
nifHNitrogenase iron protein NifH; Belongs to the NifH/BchL/ChlL family. (289 aa)
hemHFerrochelatase HemH; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (363 aa)
pucCPucC protein. (470 aa)
cobDPutative cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (306 aa)
cbiXCobalamin (Vitamin B12) biosynthesis CbiX protein; Protein synonym:sirohydrochlorin cobaltochelatase. (123 aa)
RGE_29420Tetrapyrrole methylase family protein. (847 aa)
hemNOxygen-independent coproporphyrinogen III oxidase HemN; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (462 aa)
RGE_33400PucC family protein; Protein synonym:ORF440 protein; similar to ORF428 product of Rhodobacter capsulatus. (440 aa)
bchGGeranylgeranyl bacteriochlorophyll synthase BchG. (294 aa)
bchF2-vinyl bacteriochlorophillide hydratase BchF. (169 aa)
bchNLight-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (427 aa)
bchBLight-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (543 aa)
nirDLNitrite reductase heme biosynthesis D/L protein,putative. (329 aa)
nirEuroporphyrinogen-III C-methyltransferase NirE. (272 aa)
RGE_04870Hypothetical protein. (63 aa)
hemEUroporphyrinogen decarboxylase HemE; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (365 aa)
bchIProtoporphyrin IX magnesium-chelatase BchI; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (331 aa)
cobSCobalamin-5'-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (261 aa)
cobT-2Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (342 aa)
cobQCobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (490 aa)
cobUBifunctional adenosylcobalamin biosynthesis protein CobU; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (182 aa)
RGE_14540Hypothetical protein. (354 aa)
cbiBCobalamin biosynthesis protein CbiB; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (329 aa)
hemLGlutamate-1-semialdehyde 2,1-aminomutase HemL; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (494 aa)
bchDProtoporphyrin IX magnesium-chelatase BchD. (581 aa)
bchJ4-vinyl protochlorophyllidereductase BchJ. (195 aa)
RGE_44550Hypothetical protein. (216 aa)
cobOCob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (189 aa)
RGE_44500Mg-chelatase subunit ChlD-like protein. (151 aa)
RGE_44510Putative magnesium-chelatase subunit. (335 aa)
cobU-2Bifunctional adenosylcobalamin biosynthesis protein CobU; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (189 aa)
cobQ-3Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (504 aa)
cobQ-2Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (509 aa)
hemBPorphobilinogen synthase HemB; Belongs to the ALAD family. (334 aa)
RGE_44140Hypothetical protein. (142 aa)
nifK-2Nitrogenase molybdenum-iron protein beta chain NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. (519 aa)
nifH-2Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (293 aa)
hemAglutamyl-tRNA reductase HemA; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (431 aa)
hemL-2Glutamate-1-semialdehyde 2,1-aminomutase HemL; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. (429 aa)
ctaACytochrome oxidase assembly CtaA. (373 aa)
ctaBProtoheme IX farnesyltransferase CtaB; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (305 aa)
RGE_38910Putative cob(II)yrinic acid a,c-diamide reductase. (359 aa)
hemFCoproporphyrinogen III oxidase, aerobic HemF; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. (308 aa)
hemCPorphobilinogen deaminase HemC; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. (309 aa)
hemDuroporphyrinogen-III synthase HemD; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (257 aa)
Your Current Organism:
Rubrivivax gelatinosus
NCBI taxonomy Id: 983917
Other names: R. gelatinosus IL144, Rubrivivax gelatinosus IL144, Rubrivivax gelatinosus str. IL144, Rubrivivax gelatinosus strain IL144
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