Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fdsB | fdsG | RGE_36650 | RGE_36660 | NAD-dependent formate dehydrogenase, beta subunit FdsB. | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | 0.999 |
| fdsB | nuoE | RGE_36650 | RGE_15610 | NAD-dependent formate dehydrogenase, beta subunit FdsB. | NADH-quinone oxidoreductase, E subunit NuoE. | 0.996 |
| fdsB | nuoG | RGE_36650 | RGE_15630 | NAD-dependent formate dehydrogenase, beta subunit FdsB. | NADH-quinone oxidoreductase, G subunit NuoG; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.993 |
| fdsB | nuoM | RGE_36650 | RGE_15690 | NAD-dependent formate dehydrogenase, beta subunit FdsB. | NADH-quinone oxidoreductase, M subunit NuoM. | 0.979 |
| fdsG | fdsB | RGE_36660 | RGE_36650 | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | NAD-dependent formate dehydrogenase, beta subunit FdsB. | 0.999 |
| fdsG | nuoE | RGE_36660 | RGE_15610 | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | NADH-quinone oxidoreductase, E subunit NuoE. | 0.760 |
| fdsG | nuoF | RGE_36660 | RGE_15620 | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | NADH-quinone oxidoreductase, F subunit NuoF; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.993 |
| fdsG | nuoG | RGE_36660 | RGE_15630 | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | NADH-quinone oxidoreductase, G subunit NuoG; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.991 |
| fdsG | nuoM | RGE_36660 | RGE_15690 | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | NADH-quinone oxidoreductase, M subunit NuoM. | 0.982 |
| nuoE | fdsB | RGE_15610 | RGE_36650 | NADH-quinone oxidoreductase, E subunit NuoE. | NAD-dependent formate dehydrogenase, beta subunit FdsB. | 0.996 |
| nuoE | fdsG | RGE_15610 | RGE_36660 | NADH-quinone oxidoreductase, E subunit NuoE. | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | 0.760 |
| nuoE | nuoF | RGE_15610 | RGE_15620 | NADH-quinone oxidoreductase, E subunit NuoE. | NADH-quinone oxidoreductase, F subunit NuoF; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.999 |
| nuoE | nuoG | RGE_15610 | RGE_15630 | NADH-quinone oxidoreductase, E subunit NuoE. | NADH-quinone oxidoreductase, G subunit NuoG; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.999 |
| nuoE | nuoM | RGE_15610 | RGE_15690 | NADH-quinone oxidoreductase, E subunit NuoE. | NADH-quinone oxidoreductase, M subunit NuoM. | 0.996 |
| nuoF | fdsG | RGE_15620 | RGE_36660 | NADH-quinone oxidoreductase, F subunit NuoF; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | 0.993 |
| nuoF | nuoE | RGE_15620 | RGE_15610 | NADH-quinone oxidoreductase, F subunit NuoF; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH-quinone oxidoreductase, E subunit NuoE. | 0.999 |
| nuoF | nuoG | RGE_15620 | RGE_15630 | NADH-quinone oxidoreductase, F subunit NuoF; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH-quinone oxidoreductase, G subunit NuoG; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.999 |
| nuoF | nuoM | RGE_15620 | RGE_15690 | NADH-quinone oxidoreductase, F subunit NuoF; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH-quinone oxidoreductase, M subunit NuoM. | 0.999 |
| nuoG | fdsB | RGE_15630 | RGE_36650 | NADH-quinone oxidoreductase, G subunit NuoG; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | NAD-dependent formate dehydrogenase, beta subunit FdsB. | 0.993 |
| nuoG | fdsG | RGE_15630 | RGE_36660 | NADH-quinone oxidoreductase, G subunit NuoG; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | NAD-dependent formate dehydrogenase, gamma subunit FdsG. | 0.991 |
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