STRINGSTRING
RGE_20220 RGE_20220 RGE_22460 RGE_22460 RGE_23250 RGE_23250 msrB msrB RGE_30160 RGE_30160 RGE_08950 RGE_08950 RGE_21340 RGE_21340
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RGE_20220Putative lyase. (149 aa)
RGE_22460Putative lyase. (136 aa)
RGE_23250Putative lyase. (155 aa)
msrBProtein synonym:peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. (148 aa)
RGE_30160Putative lyase. (131 aa)
RGE_08950Putative lyase. (133 aa)
RGE_21340Putative lyase. (171 aa)
Your Current Organism:
Rubrivivax gelatinosus
NCBI taxonomy Id: 983917
Other names: R. gelatinosus IL144, Rubrivivax gelatinosus IL144, Rubrivivax gelatinosus str. IL144, Rubrivivax gelatinosus strain IL144
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