STRINGSTRING
fixB fixB RGE_37010 RGE_37010 ilvI ilvI etfL etfL xsc xsc pntB-2 pntB-2 menD menD RGE_12800 RGE_12800 RGE_32390 RGE_32390 RGE_37060 RGE_37060 pntB pntB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fixBPutative electron transfer flavoprotein alpha-subunit FixB. (366 aa)
RGE_37010Protein synonym:acetohydroxy-acid synthase large subunit; Belongs to the TPP enzyme family. (584 aa)
ilvIProtein synonym:acetolactate synthase I/II/III large subunit. (590 aa)
etfLElectron transfer flavoprotein alpha-subunit EtfL. (310 aa)
xscSulfoacetaldehyde acetyltransferase Xsc; Belongs to the TPP enzyme family. (570 aa)
pntB-2NAD(P) transhydrogenase, beta subunit PntB; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. (473 aa)
menD2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase MenD; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. (600 aa)
RGE_12800NAD-dependent deacetylase; Protein synonym:regulatory protein SIR2 homolog. (242 aa)
RGE_32390Protein synonym:acetohydroxy-acid synthase large subunit; Belongs to the TPP enzyme family. (566 aa)
RGE_37060Putative hydrolase. (277 aa)
pntBNAD(P) transhydrogenase, beta subunit PntB; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. (474 aa)
Your Current Organism:
Rubrivivax gelatinosus
NCBI taxonomy Id: 983917
Other names: R. gelatinosus IL144, Rubrivivax gelatinosus IL144, Rubrivivax gelatinosus str. IL144, Rubrivivax gelatinosus strain IL144
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