(31 nodes) Mixed, incl. Small GTPase Rho, and CDC42 GTPase cycle network (Drechmeria coniospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DCS_06236	Uncharacterized protein. (1000 aa)
	DCS_06440	Ras-related GTPase, Rho2 subfamily. (198 aa)
	DCS_06537	Cell division control protein Cdc25. (1980 aa)
	DCS_06766	RAS small monomeric GTPase. (468 aa)
	DCS_07000	Non-specific serine/threonine protein kinase. (845 aa)
	DCS_07323	Small GTPase superfamily. (215 aa)
	DCS_07391	Uncharacterized protein. (1162 aa)
	DCS_07515	RhoGAP domain protein. (1760 aa)
	DCS_07548	Rho guanyl nucleotide exchange factor. (1883 aa)
	DCS_07654	Ras family protein. (274 aa)
	DCS_07805	Cell division control protein 42. (195 aa)
	DCS_08179	Uncharacterized protein. (375 aa)
	DCS_03617	Chitin synthase export chaperone. (361 aa)
	DCS_04002	Non-specific serine/threonine protein kinase. (713 aa)
	DCS_04083	Uncharacterized protein. (250 aa)
	DCS_04827	Protein kinase domain-containing protein. (552 aa)
	DCS_04775	Von Willebrand and RING finger domain containing protein. (1124 aa)
	DCS_05079	Uncharacterized protein. (215 aa)
	DCS_05418	Putative GTPase Rho. (195 aa)
	DCS_00063	Uncharacterized protein. (209 aa)
	DCS_00207	Polarity protein BemA. (589 aa)
	DCS_00224	Uncharacterized protein. (198 aa)
	DCS_00312	RhoGAP domain-containing protein. (1128 aa)
	DCS_00938	Uncharacterized protein. (161 aa)
	DCS_00977	RacA. (150 aa)
	DCS_01028	RhoGAP domain containing protein. (792 aa)
	DCS_01807	Rho guanyl nucleotide exchange factor. (1255 aa)
	DCS_01936	Uncharacterized protein. (493 aa)
	DCS_02573	GPI biosynthesis protein Pig-F. (1164 aa)
	DCS_02774	Rho GTPase effector BNI1. (1682 aa)
	DCS_02978	Rho GTPase. (615 aa)

Your Current Organism:

Drechmeria coniospora

NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCS_00063	DCS_00207	A0A151GPB8	A0A151GPR9	Uncharacterized protein.	Polarity protein BemA.	0.693
DCS_00063	DCS_00224	A0A151GPB8	A0A151GPS4	Uncharacterized protein.	Uncharacterized protein.	0.906
DCS_00063	DCS_00312	A0A151GPB8	A0A151GQB1	Uncharacterized protein.	RhoGAP domain-containing protein.	0.998
DCS_00063	DCS_00938	A0A151GPB8	A0A151GRQ5	Uncharacterized protein.	Uncharacterized protein.	0.819
DCS_00063	DCS_00977	A0A151GPB8	A0A151GRY2	Uncharacterized protein.	RacA.	0.725
DCS_00063	DCS_01028	A0A151GPB8	A0A151GS04	Uncharacterized protein.	RhoGAP domain containing protein.	0.843
DCS_00063	DCS_01807	A0A151GPB8	A0A151GU79	Uncharacterized protein.	Rho guanyl nucleotide exchange factor.	0.810
DCS_00063	DCS_01936	A0A151GPB8	A0A151GUP1	Uncharacterized protein.	Uncharacterized protein.	0.682
DCS_00063	DCS_02573	A0A151GPB8	A0A151GWI8	Uncharacterized protein.	GPI biosynthesis protein Pig-F.	0.701
DCS_00063	DCS_02774	A0A151GPB8	A0A151GX37	Uncharacterized protein.	Rho GTPase effector BNI1.	0.751
DCS_00063	DCS_02978	A0A151GPB8	A0A151GXK4	Uncharacterized protein.	Rho GTPase.	0.629
DCS_00063	DCS_03617	A0A151GPB8	A0A151GHQ3	Uncharacterized protein.	Chitin synthase export chaperone.	0.651
DCS_00063	DCS_04002	A0A151GPB8	A0A151GIQ0	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.691
DCS_00063	DCS_04083	A0A151GPB8	A0A151GJ12	Uncharacterized protein.	Uncharacterized protein.	0.947
DCS_00063	DCS_04775	A0A151GPB8	A0A151GL80	Uncharacterized protein.	Von Willebrand and RING finger domain containing protein.	0.547
DCS_00063	DCS_04827	A0A151GPB8	A0A151GL30	Uncharacterized protein.	Protein kinase domain-containing protein.	0.691
DCS_00063	DCS_05079	A0A151GPB8	A0A151GLU6	Uncharacterized protein.	Uncharacterized protein.	0.676
DCS_00063	DCS_05418	A0A151GPB8	A0A151GMQ3	Uncharacterized protein.	Putative GTPase Rho.	0.620
DCS_00063	DCS_06236	A0A151GPB8	A0A151GAZ6	Uncharacterized protein.	Uncharacterized protein.	0.700
DCS_00063	DCS_06440	A0A151GPB8	A0A151GBJ7	Uncharacterized protein.	Ras-related GTPase, Rho2 subfamily.	0.538