(7 nodes) Nuclear pore central transport channel network (Drechmeria coniospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DCS_04250	Nuclear transport factor 2 domain containing protein. (169 aa)
	DCS_05259	Nsp1_C domain-containing protein. (670 aa)
	DCS_05742	GAR domain-containing protein. (914 aa)
	DCS_02095	Nup54 domain-containing protein. (344 aa)
	DCS_03112	Nucleoporin NUP49/NSP49. (470 aa)
	DCS_03867	Nuclear pore complex subunit. (1425 aa)
	DCS_07117	Nuclear transport factor 2. (126 aa)

Your Current Organism:

Drechmeria coniospora

NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCS_02095	DCS_03112	A0A151GV10	A0A151GXZ8	Nup54 domain-containing protein.	Nucleoporin NUP49/NSP49.	0.909
DCS_02095	DCS_03867	A0A151GV10	A0A151GII3	Nup54 domain-containing protein.	Nuclear pore complex subunit.	0.976
DCS_02095	DCS_05259	A0A151GV10	A0A151GMC0	Nup54 domain-containing protein.	Nsp1_C domain-containing protein.	0.998
DCS_02095	DCS_07117	A0A151GV10	A0A151GDK1	Nup54 domain-containing protein.	Nuclear transport factor 2.	0.548
DCS_03112	DCS_02095	A0A151GXZ8	A0A151GV10	Nucleoporin NUP49/NSP49.	Nup54 domain-containing protein.	0.909
DCS_03112	DCS_03867	A0A151GXZ8	A0A151GII3	Nucleoporin NUP49/NSP49.	Nuclear pore complex subunit.	0.907
DCS_03112	DCS_05259	A0A151GXZ8	A0A151GMC0	Nucleoporin NUP49/NSP49.	Nsp1_C domain-containing protein.	0.902
DCS_03867	DCS_02095	A0A151GII3	A0A151GV10	Nuclear pore complex subunit.	Nup54 domain-containing protein.	0.976
DCS_03867	DCS_03112	A0A151GII3	A0A151GXZ8	Nuclear pore complex subunit.	Nucleoporin NUP49/NSP49.	0.907
DCS_03867	DCS_05259	A0A151GII3	A0A151GMC0	Nuclear pore complex subunit.	Nsp1_C domain-containing protein.	0.983
DCS_03867	DCS_07117	A0A151GII3	A0A151GDK1	Nuclear pore complex subunit.	Nuclear transport factor 2.	0.580
DCS_05259	DCS_02095	A0A151GMC0	A0A151GV10	Nsp1_C domain-containing protein.	Nup54 domain-containing protein.	0.998
DCS_05259	DCS_03112	A0A151GMC0	A0A151GXZ8	Nsp1_C domain-containing protein.	Nucleoporin NUP49/NSP49.	0.902
DCS_05259	DCS_03867	A0A151GMC0	A0A151GII3	Nsp1_C domain-containing protein.	Nuclear pore complex subunit.	0.983
DCS_05259	DCS_07117	A0A151GMC0	A0A151GDK1	Nsp1_C domain-containing protein.	Nuclear transport factor 2.	0.547
DCS_07117	DCS_02095	A0A151GDK1	A0A151GV10	Nuclear transport factor 2.	Nup54 domain-containing protein.	0.548
DCS_07117	DCS_03867	A0A151GDK1	A0A151GII3	Nuclear transport factor 2.	Nuclear pore complex subunit.	0.580
DCS_07117	DCS_05259	A0A151GDK1	A0A151GMC0	Nuclear transport factor 2.	Nsp1_C domain-containing protein.	0.547