(14 nodes) Von Willebrand factor A-like domain superfamily network (Drechmeria coniospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DCS_06154	Transcription factor Tfb4. (373 aa)
	DCS_01295	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. (728 aa)
	DCS_01225	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4943 aa)
	DCS_00797	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (787 aa)
	DCS_00743	Ku70 protein. (649 aa)
	DCS_05836	Uncharacterized protein. (956 aa)
	DCS_04775	Von Willebrand and RING finger domain containing protein. (1124 aa)
	DCS_04192	Sec23/Sec24 family protein. (1148 aa)
	DCS_03763	Von Willebrand factor type A domain-containing protein. (1313 aa)
	DCS_08027	Protein transport protein SEC24. (1002 aa)
	DCS_07780	U-box domain-containing protein. (962 aa)
	DCS_07467	26S proteasome regulatory subunit S5A, multiubiquitin chain binding protein. (309 aa)
	DCS_07229	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (484 aa)
	DCS_07175	VWFA domain-containing protein. (268 aa)

Your Current Organism:

Drechmeria coniospora

NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCS_00743	DCS_01295	A0A151GRD6	A0A151GSW2	Ku70 protein.	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.	0.999
DCS_00797	DCS_04192	A0A151GRE8	A0A151GJ93	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Sec23/Sec24 family protein.	0.997
DCS_00797	DCS_08027	A0A151GRE8	A0A151GGA1	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein SEC24.	0.998
DCS_01295	DCS_00743	A0A151GSW2	A0A151GRD6	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.	Ku70 protein.	0.999
DCS_04192	DCS_00797	A0A151GJ93	A0A151GRE8	Sec23/Sec24 family protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.997
DCS_04192	DCS_08027	A0A151GJ93	A0A151GGA1	Sec23/Sec24 family protein.	Protein transport protein SEC24.	0.987
DCS_06154	DCS_07229	A0A151GAU0	A0A151GDU8	Transcription factor Tfb4.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.998
DCS_07229	DCS_06154	A0A151GDU8	A0A151GAU0	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	Transcription factor Tfb4.	0.998
DCS_07229	DCS_08027	A0A151GDU8	A0A151GGA1	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	Protein transport protein SEC24.	0.422
DCS_08027	DCS_00797	A0A151GGA1	A0A151GRE8	Protein transport protein SEC24.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.998
DCS_08027	DCS_04192	A0A151GGA1	A0A151GJ93	Protein transport protein SEC24.	Sec23/Sec24 family protein.	0.987
DCS_08027	DCS_07229	A0A151GGA1	A0A151GDU8	Protein transport protein SEC24.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.422