(24 nodes) SNARE interactions in vesicular transport network (Drechmeria coniospora)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DCS_06162	Vesicle transport v-SNARE protein. (227 aa)
	DCS_06751	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (280 aa)
	DCS_06876	Uncharacterized protein. (140 aa)
	DCS_07007	SNARE protein. (97 aa)
	DCS_07572	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (228 aa)
	DCS_07867	t-SNARE coiled-coil homology domain-containing protein. (264 aa)
	DCS_07907	Plasma membrane SNARE protein. (438 aa)
	DCS_03426	Vacuolar morphogenesis protein 7 like protein. (361 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (647 aa)
	DCS_04004	t-SNARE syntaxin. (319 aa)
	DCS_04441	Uncharacterized protein; Belongs to the synaptobrevin family. (231 aa)
	DCS_04723	Sec20 domain protein. (401 aa)
	DCS_04951	Synaptobrevin. (189 aa)
	DCS_05343	Ssoi. (325 aa)
	DCS_00460	Syntaxin. (354 aa)
	DCS_00612	Uncharacterized protein; Belongs to the synaptobrevin family. (197 aa)
	DCS_00850	t-SNARE affecting a late Golgi compartment protein 2. (343 aa)
	DCS_02307	t-SNARE coiled-coil homology domain-containing protein. (177 aa)
	DCS_02559	Synaptobrevin. (357 aa)
	DCS_02657	t-SNARE coiled-coil homology domain-containing protein. (350 aa)
	DCS_02696	Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (320 aa)
	DCS_02784	Uncharacterized protein; Belongs to the synaptobrevin family. (216 aa)
	DCS_06131	SNARE domain containing protein. (360 aa)
	DCS_06204	Uncharacterized protein. (284 aa)

Your Current Organism:

Drechmeria coniospora

NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCS_00460	DCS_00612	A0A151GQG5	A0A151GR58	Syntaxin.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.669
DCS_00460	DCS_00850	A0A151GQG5	A0A151GRJ0	Syntaxin.	t-SNARE affecting a late Golgi compartment protein 2.	0.658
DCS_00460	DCS_02307	A0A151GQG5	A0A151GVN8	Syntaxin.	t-SNARE coiled-coil homology domain-containing protein.	0.531
DCS_00460	DCS_02559	A0A151GQG5	A0A151GWC7	Syntaxin.	Synaptobrevin.	0.988
DCS_00460	DCS_02657	A0A151GQG5	A0A151GWM1	Syntaxin.	t-SNARE coiled-coil homology domain-containing protein.	0.589
DCS_00460	DCS_02784	A0A151GQG5	A0A151GX46	Syntaxin.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.983
DCS_00460	DCS_04004	A0A151GQG5	A0A151GIS4	Syntaxin.	t-SNARE syntaxin.	0.875
DCS_00460	DCS_04441	A0A151GQG5	A0A151GK96	Syntaxin.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.626
DCS_00460	DCS_04951	A0A151GQG5	A0A151GLH2	Syntaxin.	Synaptobrevin.	0.616
DCS_00460	DCS_05343	A0A151GQG5	A0A151GMK5	Syntaxin.	Ssoi.	0.629
DCS_00460	DCS_06131	A0A151GQG5	A0A151GAR6	Syntaxin.	SNARE domain containing protein.	0.726
DCS_00460	DCS_06162	A0A151GQG5	A0A151GAV5	Syntaxin.	Vesicle transport v-SNARE protein.	0.714
DCS_00460	DCS_06204	A0A151GQG5	A0A151GAY0	Syntaxin.	Uncharacterized protein.	0.561
DCS_00460	DCS_07007	A0A151GQG5	A0A151GD71	Syntaxin.	SNARE protein.	0.531
DCS_00460	DCS_07572	A0A151GQG5	A0A151GEU1	Syntaxin.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.556
DCS_00460	DCS_07867	A0A151GQG5	A0A151GFR1	Syntaxin.	t-SNARE coiled-coil homology domain-containing protein.	0.589
DCS_00460	DCS_07907	A0A151GQG5	A0A151GFU9	Syntaxin.	Plasma membrane SNARE protein.	0.754
DCS_00612	DCS_00460	A0A151GR58	A0A151GQG5	Uncharacterized protein; Belongs to the synaptobrevin family.	Syntaxin.	0.669
DCS_00612	DCS_00850	A0A151GR58	A0A151GRJ0	Uncharacterized protein; Belongs to the synaptobrevin family.	t-SNARE affecting a late Golgi compartment protein 2.	0.974
DCS_00612	DCS_02307	A0A151GR58	A0A151GVN8	Uncharacterized protein; Belongs to the synaptobrevin family.	t-SNARE coiled-coil homology domain-containing protein.	0.994