STRINGSTRING
hemH hemH SGRA_0930 SGRA_0930 SGRA_0931 SGRA_0931 SGRA_0933 SGRA_0933 hemN hemN SGRA_1372 SGRA_1372 SGRA_1373 SGRA_1373 SGRA_1374 SGRA_1374 SGRA_1375 SGRA_1375 SGRA_1376 SGRA_1376 SGRA_1377 SGRA_1377 SGRA_1378 SGRA_1378 coaE coaE SGRA_2014 SGRA_2014 SGRA_2015 SGRA_2015 SGRA_2016 SGRA_2016 arsA arsA hemA hemA hemC hemC hemE hemE hemL hemL hemF hemF hemB hemB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (340 aa)
SGRA_0930Hypothetical protein. (41 aa)
SGRA_0931Hypothetical protein. (350 aa)
SGRA_0933Phosphopantetheinyl transferase-like protein; COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (210 aa)
hemNOxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (349 aa)
SGRA_1372Cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (185 aa)
SGRA_1373COG1981 Predicted membrane protein. (188 aa)
SGRA_1374Hypothetical protein. (137 aa)
SGRA_1375RNA polymerase, sigma-24 subunit, ECF subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (190 aa)
SGRA_1376Hypothetical protein. (296 aa)
SGRA_1377Hypothetical protein. (68 aa)
SGRA_1378Hypothetical protein. (69 aa)
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (203 aa)
SGRA_2014Hypothetical protein. (61 aa)
SGRA_2015Porphobilinogen deaminase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (221 aa)
SGRA_2016Hypothetical protein. (42 aa)
arsAArsenite-activated ATPase (arsA) subfamily protein; COG0003 Oxyanion-translocating ATPase. (384 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (466 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (298 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (342 aa)
hemLGlutamate-1-semialdehyde-2,1-aminomutase; COG0001 Glutamate-1-semialdehyde aminotransferase. (428 aa)
hemFCOG0408 Coproporphyrinogen III oxidase. (308 aa)
hemBCOG0113 Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (333 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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