7 items (Saprospira grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SGRA_0205	Hypothetical protein. (170 aa)
	tatA	Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (73 aa)
	tatC	Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. (293 aa)
	SGRA_2888	Hypothetical protein. (140 aa)
	SGRA_2890	COG2309 Leucyl aminopeptidase (aminopeptidase T). (365 aa)
	SGRA_2892	Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (367 aa)
	SGRA_2893	Hypothetical protein. (219 aa)

Your Current Organism:

Saprospira grandis

NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGRA_0205	SGRA_2892	SGRA_0205	SGRA_2892	Hypothetical protein.	Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.	0.612
SGRA_2888	tatC	SGRA_2888	SGRA_2887	Hypothetical protein.	Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	0.554
SGRA_2890	SGRA_2892	SGRA_2890	SGRA_2892	COG2309 Leucyl aminopeptidase (aminopeptidase T).	Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.	0.508
SGRA_2890	SGRA_2893	SGRA_2890	SGRA_2893	COG2309 Leucyl aminopeptidase (aminopeptidase T).	Hypothetical protein.	0.508
SGRA_2892	SGRA_0205	SGRA_2892	SGRA_0205	Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.	Hypothetical protein.	0.612
SGRA_2892	SGRA_2890	SGRA_2892	SGRA_2890	Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.	COG2309 Leucyl aminopeptidase (aminopeptidase T).	0.508
SGRA_2892	SGRA_2893	SGRA_2892	SGRA_2893	Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.	Hypothetical protein.	0.773
SGRA_2893	SGRA_2890	SGRA_2893	SGRA_2890	Hypothetical protein.	COG2309 Leucyl aminopeptidase (aminopeptidase T).	0.508
SGRA_2893	SGRA_2892	SGRA_2893	SGRA_2892	Hypothetical protein.	Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.	0.773
tatA	tatC	SGRA_2066	SGRA_2887	Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	0.967
tatC	SGRA_2888	SGRA_2887	SGRA_2888	Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	Hypothetical protein.	0.554
tatC	tatA	SGRA_2887	SGRA_2066	Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.967