STRINGSTRING
pepP pepP SGRA_2821 SGRA_2821 pstS pstS SGRA_2824 SGRA_2824 SGRA_2826 SGRA_2826 pepT pepT pepF pepF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pepPCOG0006 Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. (466 aa)
SGRA_2821Hypothetical protein. (63 aa)
pstSOmpA family protein; COG0226 ABC-type phosphate transport system, periplasmic component. (313 aa)
SGRA_2824Hypothetical protein. (333 aa)
SGRA_2826Beta-lactamase domain protein; COG0491 Zn-dependent hydrolases, including glyoxylases. (297 aa)
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (409 aa)
pepFOligoendopeptidase, M3 family protein; COG1164 Oligoendopeptidase F. (562 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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