STRINGSTRING
phhA phhA hppD hppD SGRA_2003 SGRA_2003 SGRA_2004 SGRA_2004 SGRA_2006 SGRA_2006 SGRA_2009 SGRA_2009 SGRA_2010 SGRA_2010 phhB phhB SGRA_2171 SGRA_2171 SGRA_2173 SGRA_2173 SGRA_3051 SGRA_3051 hmgA hmgA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
phhACOG3186 Phenylalanine-4-hydroxylase. (245 aa)
hppDCOG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins. (364 aa)
SGRA_2003COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. (174 aa)
SGRA_2004Legume lectin beta domain protein. (335 aa)
SGRA_2006Hypothetical protein. (322 aa)
SGRA_2009Hypothetical protein. (32 aa)
SGRA_2010Fumarylacetoacetate (FAA) hydrolase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (204 aa)
phhBTranscriptional coactivator/pterin dehydratase; COG2154 Pterin-4a-carbinolamine dehydratase. (87 aa)
SGRA_2171Hypothetical protein. (133 aa)
SGRA_2173Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (89 aa)
SGRA_3051Fumarylacetoacetase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (424 aa)
hmgACOG3508 Homogentisate 1,2-dioxygenase. (386 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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