STRINGSTRING
SGRA_0010 SGRA_0010 SGRA_0011 SGRA_0011 SGRA_0012 SGRA_0012 SGRA_0013 SGRA_0013 SGRA_0014 SGRA_0014 SGRA_0015 SGRA_0015 SGRA_0016 SGRA_0016 SGRA_0196 SGRA_0196 SGRA_0197 SGRA_0197 SGRA_0198 SGRA_0198 SGRA_0620 SGRA_0620 tatD tatD SGRA_0622 SGRA_0622 SGRA_0624 SGRA_0624 rpoE rpoE SGRA_0626 SGRA_0626 SGRA_0726 SGRA_0726 SGRA_0727 SGRA_0727 rpoE-2 rpoE-2 SGRA_0729 SGRA_0729 SGRA_0731 SGRA_0731 SGRA_1034 SGRA_1034 rpoE-3 rpoE-3 SGRA_1036 SGRA_1036 rpoE-4 rpoE-4 SGRA_1050 SGRA_1050 SGRA_1185 SGRA_1185 SGRA_1186 SGRA_1186 flgJ flgJ SGRA_1189 SGRA_1189 SGRA_1359 SGRA_1359 SGRA_1360 SGRA_1360 SGRA_1361 SGRA_1361 SGRA_1531 SGRA_1531 SGRA_1613 SGRA_1613 rpoE-5 rpoE-5 SGRA_1615 SGRA_1615 SGRA_1616 SGRA_1616 SGRA_1617 SGRA_1617 rpoE-6 rpoE-6 SGRA_1621 SGRA_1621 SGRA_1622 SGRA_1622 SGRA_1760 SGRA_1760 SGRA_1761 SGRA_1761 SGRA_1762 SGRA_1762 SGRA_1763 SGRA_1763 rpoE-7 rpoE-7 SGRA_1765 SGRA_1765 SGRA_1767 SGRA_1767 SGRA_2192 SGRA_2192 SGRA_2212 SGRA_2212 SGRA_2213 SGRA_2213 SGRA_2214 SGRA_2214 SGRA_2215 SGRA_2215 SGRA_2216 SGRA_2216 SGRA_2217 SGRA_2217 rpoE-8 rpoE-8 SGRA_2412 SGRA_2412 SGRA_2452 SGRA_2452 SGRA_2453 SGRA_2453 SGRA_2456 SGRA_2456 SGRA_2457 SGRA_2457 SGRA_2458 SGRA_2458 SGRA_2468 SGRA_2468 rpoE-9 rpoE-9 SGRA_2471 SGRA_2471 SGRA_2472 SGRA_2472 SGRA_2590 SGRA_2590 SGRA_2591 SGRA_2591 dacB dacB SGRA_3104 SGRA_3104 SGRA_3118 SGRA_3118 SGRA_3119 SGRA_3119 SGRA_3120 SGRA_3120 marC marC SGRA_3122 SGRA_3122 SGRA_3125 SGRA_3125 menA menA SGRA_3269 SGRA_3269 SGRA_3270 SGRA_3270 SGRA_3271 SGRA_3271 SGRA_3272 SGRA_3272 SGRA_3273 SGRA_3273 SGRA_3274 SGRA_3274 SGRA_3275 SGRA_3275 SGRA_3276 SGRA_3276 rpoE-10 rpoE-10 SGRA_3278 SGRA_3278 SGRA_3279 SGRA_3279 SGRA_3371 SGRA_3371 SGRA_3372 SGRA_3372 SGRA_3373 SGRA_3373 SGRA_3374 SGRA_3374 SGRA_3573 SGRA_3573 SGRA_3574 SGRA_3574 SGRA_3575 SGRA_3575 SGRA_3576 SGRA_3576 SGRA_3577 SGRA_3577 SGRA_3578 SGRA_3578 SGRA_3579 SGRA_3579 SGRA_3580 SGRA_3580 SGRA_3661 SGRA_3661 SGRA_3662 SGRA_3662 SGRA_3663 SGRA_3663 SGRA_3827 SGRA_3827 SGRA_3828 SGRA_3828 SGRA_3830 SGRA_3830 SGRA_3831 SGRA_3831 SGRA_3832 SGRA_3832 SGRA_3833 SGRA_3833 SGRA_4095 SGRA_4095
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SGRA_0010Hypothetical protein. (118 aa)
SGRA_0011Hypothetical protein. (173 aa)
SGRA_0012Hypothetical protein. (49 aa)
SGRA_0013Hypothetical protein; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. (88 aa)
SGRA_0014Hypothetical protein. (161 aa)
SGRA_0015Calcium-binding EF-hand-containing protein; COG5126 Ca2+-binding protein (EF-Hand superfamily). (150 aa)
SGRA_0016Hypothetical protein. (81 aa)
SGRA_0196Hypothetical protein. (540 aa)
SGRA_0197RNA polymerase, sigma-24 subunit, ecf subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
SGRA_0198COG4399 Uncharacterized protein conserved in bacteria. (418 aa)
SGRA_0620Terpene synthase metal-binding domain-containing protein. (319 aa)
tatDHydrolase, TatD family protein; COG0084 Mg-dependent DNase. (272 aa)
SGRA_0622COG0392 Predicted integral membrane protein. (382 aa)
SGRA_0624Hypothetical protein. (109 aa)
rpoERNA polymerase, sigma-24 subunit, ecf subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)
SGRA_0626COG5343 Uncharacterized protein conserved in bacteria. (281 aa)
SGRA_0726COG3210 Large exoproteins involved in heme utilization or adhesion. (529 aa)
SGRA_0727Hypothetical protein. (418 aa)
rpoE-2RNA polymerase, sigma-24 subunit, ecf subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa)
SGRA_0729Hypothetical protein. (59 aa)
SGRA_0731Hypothetical protein. (41 aa)
SGRA_1034Hypothetical protein. (65 aa)
rpoE-3RNA polymerase, sigma-24 subunit, ecf subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (152 aa)
SGRA_1036Hypothetical protein. (446 aa)
rpoE-4RNA polymerase, sigma-24 subunit, ECF subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
SGRA_1050Hypothetical protein. (558 aa)
SGRA_1185Hypothetical protein. (405 aa)
SGRA_1186Hypothetical protein. (87 aa)
flgJCOG1705 Muramidase (flagellum-specific). (202 aa)
SGRA_1189Amidohydrolase 3; COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. (564 aa)
SGRA_1359Maf-like protein. (269 aa)
SGRA_1360Hypothetical protein. (176 aa)
SGRA_1361Hypothetical protein. (286 aa)
SGRA_1531Hypothetical protein. (314 aa)
SGRA_1613Hypothetical protein. (82 aa)
rpoE-5COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (213 aa)
SGRA_1615Hypothetical protein. (76 aa)
SGRA_1616Hypothetical protein. (41 aa)
SGRA_1617Hypothetical protein. (120 aa)
rpoE-6RNA polymerase, sigma-24 subunit, ECF subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
SGRA_1621COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (133 aa)
SGRA_1622Hypothetical protein. (49 aa)
SGRA_1760OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (833 aa)
SGRA_1761Hypothetical protein. (393 aa)
SGRA_1762TM helix repeat-containing protein; COG0668 Small-conductance mechanosensitive channel. (280 aa)
SGRA_1763Hypothetical protein. (63 aa)
rpoE-7RNA polymerase, sigma-24 subunit, ecf subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa)
SGRA_1765Hypothetical protein. (43 aa)
SGRA_1767Hypothetical protein. (78 aa)
SGRA_2192Endonuclease/exonuclease/phosphatase family protein; COG3021 Uncharacterized protein conserved in bacteria. (364 aa)
SGRA_2212Hypothetical protein. (195 aa)
SGRA_2213Hypothetical protein. (138 aa)
SGRA_2214Hypothetical protein; COG1520 FOG: WD40-like repeat. (564 aa)
SGRA_2215Hypothetical protein. (108 aa)
SGRA_2216ABC transporter-related protein; COG1122 ABC-type cobalt transport system, ATPase component. (222 aa)
SGRA_2217Putative ABC-type Na+ efflux pump, permease component. (395 aa)
rpoE-8RNA polymerase, sigma-24 subunit, ECF subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
SGRA_2412Hypothetical protein. (83 aa)
SGRA_2452Hypothetical protein. (54 aa)
SGRA_2453COG2940 Proteins containing SET domain. (128 aa)
SGRA_2456Hypothetical protein. (42 aa)
SGRA_2457COG3228 Uncharacterized protein conserved in bacteria; Belongs to the MtfA family. (341 aa)
SGRA_2458COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. (428 aa)
SGRA_2468Hypothetical protein. (54 aa)
rpoE-9COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa)
SGRA_2471Hypothetical protein. (213 aa)
SGRA_2472Hypothetical protein. (173 aa)
SGRA_2590Hypothetical protein. (56 aa)
SGRA_2591MoeA domain protein, domain I and II; COG4282 Protein involved in beta-1,3-glucan synthesis. (217 aa)
dacBD-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase; COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). (486 aa)
SGRA_3104Hypothetical protein. (50 aa)
SGRA_3118Alpha-2-macroglobulin domain protein; COG2373 Large extracellular alpha-helical protein. (1888 aa)
SGRA_3119Hypothetical protein. (44 aa)
SGRA_3120Hypothetical protein. (71 aa)
marCMultiple antibiotic resistance (MarC)-related protein; COG2095 Multiple antibiotic transporter. (189 aa)
SGRA_3122Hypothetical protein. (32 aa)
SGRA_3125Hypothetical protein. (381 aa)
menAUbiA prenyltransferase; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases. (299 aa)
SGRA_3269Hypothetical protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (94 aa)
SGRA_3270Hypothetical protein. (329 aa)
SGRA_3271Hypothetical protein. (92 aa)
SGRA_3272COG1629 Outer membrane receptor proteins, mostly Fe transport. (739 aa)
SGRA_3273Hypothetical protein. (215 aa)
SGRA_3274Hypothetical protein. (364 aa)
SGRA_3275Hypothetical protein. (331 aa)
SGRA_3276Hypothetical protein. (190 aa)
rpoE-10RNA polymerase, sigma-24 subunit, ecf subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
SGRA_3278Hypothetical protein. (96 aa)
SGRA_3279Hypothetical protein. (146 aa)
SGRA_3371Hypothetical protein. (167 aa)
SGRA_3372Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (303 aa)
SGRA_3373Putative oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (315 aa)
SGRA_3374Hypothetical protein. (42 aa)
SGRA_3573Haloacid dehalogenase, type ii; COG1011 Predicted hydrolase (HAD superfamily). (263 aa)
SGRA_3574Peptidase S15; COG2936 Predicted acyl esterases. (621 aa)
SGRA_3575Hypothetical protein. (139 aa)
SGRA_3576Hypothetical protein. (60 aa)
SGRA_3577Hypothetical protein. (344 aa)
SGRA_3578Hypothetical protein. (109 aa)
SGRA_3579Transposase, is4 family protein; COG3666 Transposase and inactivated derivatives. (236 aa)
SGRA_3580COG3666 Transposase and inactivated derivatives. (282 aa)
SGRA_3661Hypothetical protein. (272 aa)
SGRA_3662Hypothetical protein. (278 aa)
SGRA_3663Hypothetical protein. (270 aa)
SGRA_3827Hypothetical protein. (120 aa)
SGRA_3828Hypothetical protein. (138 aa)
SGRA_3830Hypothetical protein. (31 aa)
SGRA_3831HI0933 family protein; COG2081 Predicted flavoproteins. (405 aa)
SGRA_3832Hypothetical protein. (378 aa)
SGRA_3833Endonuclease/exonuclease/phosphatase. (323 aa)
SGRA_4095Hypothetical protein. (358 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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