STRINGSTRING
astE astE hutH hutH hutU hutU SGRA_1893 SGRA_1893 SGRA_1937 SGRA_1937 hutI hutI SGRA_2469 SGRA_2469 gabD gabD SGRA_0843 SGRA_0843 SGRA_0842 SGRA_0842 SGRA_2611 SGRA_2611 SGRA_3525 SGRA_3525 SGRA_2632 SGRA_2632 SGRA_0693 SGRA_0693 SGRA_0031 SGRA_0031
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
astESuccinylglutamate desuccinylase/aspartoacylase family protein; COG2988 Succinylglutamate desuccinylase. (333 aa)
hutHCOG2986 Histidine ammonia-lyase. (500 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (672 aa)
SGRA_1893COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (506 aa)
SGRA_1937COG0506 Proline dehydrogenase. (362 aa)
hutICOG1228 Imidazolonepropionase and related amidohydrolases. (418 aa)
SGRA_2469COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (517 aa)
gabDCOG1012 NAD-dependent aldehyde dehydrogenases. (453 aa)
SGRA_0843Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. (1008 aa)
SGRA_0842Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. (430 aa)
SGRA_2611COG0069 Glutamate synthase domain 2; Belongs to the glutamate synthase family. (538 aa)
SGRA_3525COG1012 NAD-dependent aldehyde dehydrogenases. (542 aa)
SGRA_2632COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (471 aa)
SGRA_0693Hypothetical protein. (126 aa)
SGRA_0031COG3643 Glutamate formiminotransferase. (561 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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