6 items (Saprospira grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SGRA_0798	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). (286 aa)
	udk	COG0572 Uridine kinase. (209 aa)
	pyrH	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (239 aa)
	ndk	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (139 aa)
	pyrG	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (537 aa)
	upp	COG0035 Uracil phosphoribosyltransferase. (219 aa)

Your Current Organism:

Saprospira grandis

NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGRA_0798	pyrG	SGRA_0798	SGRA_0168	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.512
SGRA_0798	upp	SGRA_0798	SGRA_2526	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).	COG0035 Uracil phosphoribosyltransferase.	0.433
ndk	pyrG	SGRA_3714	SGRA_0168	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.933
ndk	pyrH	SGRA_3714	SGRA_1595	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	0.931
pyrG	SGRA_0798	SGRA_0168	SGRA_0798	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).	0.512
pyrG	ndk	SGRA_0168	SGRA_3714	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	0.933
pyrG	pyrH	SGRA_0168	SGRA_1595	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	0.610
pyrH	ndk	SGRA_1595	SGRA_3714	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	0.931
pyrH	pyrG	SGRA_1595	SGRA_0168	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.610
pyrH	udk	SGRA_1595	SGRA_1088	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	COG0572 Uridine kinase.	0.932
pyrH	upp	SGRA_1595	SGRA_2526	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	COG0035 Uracil phosphoribosyltransferase.	0.952
udk	pyrH	SGRA_1088	SGRA_1595	COG0572 Uridine kinase.	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	0.932
udk	upp	SGRA_1088	SGRA_2526	COG0572 Uridine kinase.	COG0035 Uracil phosphoribosyltransferase.	0.971
upp	SGRA_0798	SGRA_2526	SGRA_0798	COG0035 Uracil phosphoribosyltransferase.	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).	0.433
upp	pyrH	SGRA_2526	SGRA_1595	COG0035 Uracil phosphoribosyltransferase.	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	0.952
upp	udk	SGRA_2526	SGRA_1088	COG0035 Uracil phosphoribosyltransferase.	COG0572 Uridine kinase.	0.971