STRINGSTRING
SGRA_3733 SGRA_3733 SGRA_2042 SGRA_2042 folK folK SGRA_3391 SGRA_3391 SGRA_2628 SGRA_2628 SGRA_3129 SGRA_3129 SGRA_1937 SGRA_1937
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SGRA_3733COG1428 Deoxynucleoside kinases. (210 aa)
SGRA_2042Peptidase m48 ste24p; COG4783 Putative Zn-dependent protease, contains TPR repeats. (265 aa)
folK2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. (162 aa)
SGRA_3391Monooxygenase FAD-binding protein; COG0644 Dehydrogenases (flavoproteins). (388 aa)
SGRA_2628COG1428 Deoxynucleoside kinases. (219 aa)
SGRA_3129COG1231 Monoamine oxidase. (447 aa)
SGRA_1937COG0506 Proline dehydrogenase. (362 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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